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15-4453-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 254708 [Map]; Strand: c
      • AT1G01695.1 - [+] show detail - Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
        Distance: 213; Region: intergenic
      • AT1G01700.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 2
        Distance: 4787; Region: intergenic
    Flanking Genome Sequence: 15-4453-1 - 5-prime edge 
    GGGAGCGGGG AGAAGAAAAA GGAAATCAAT ATGGACAGAC GAAATTCCCA 
    AACTACCCCC ACAATATGGT TATCGTTTTT AAATCACTCA ATGTGACTTC 
    TTCGATGGCC CATGTGACNT TAGTAATACA ATCTCGTATT AGGCCCAAAT 
    ATGTTTGATA ACTAATTAAC TAGACCTTCT GATTTGCTTA GAAAGAGACG 
    AAAATTCCCA ACATACCCAT TTGACATTTT GATTTGGATA ATAATTTTTT 
    TAATATCTCC GTTACTTTAC ATATCTTAAT GCAATTTAAC CATTTTTGTG 
    ATTATCTTCA AGCTCAAGCA TCAGCTGTTC CAATAATTCA TTCAATATCA 
    ATTCGCTAGT CTCAAAGCCA ATACACTCAA GGTCACATCT AATGTCTAAC 
    CAGCTCCTGT GTTTAGCCAT ATCTTCTCTA ACTCTTTCTT CCAACGATCG 
    ACGGAGTTGC ATTGGCAAGA GATGACAATA AACCTTTTCT TGAACCTCGG 
    GAACAATGCT TTCAACACTA TATGGCAAGA CTTGGGTCCT GGTTTCAGCA 
    AAGGAAACCC ATTGAGGAAA CCTGCAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 254824 [Map]; Strand: c
      • AT1G01695.1 - [+] show detail - Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
        Distance: 329; Region: intergenic
      • AT1G01700.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 2
        Distance: 4671; Region: intergenic
    Flanking Genome Sequence: 15-4453-1 - 3-prime edge 
    CCGCTCCCGT TACAAAGATT TCCATTTTTC CATGTTTATG AATATAGCAG 
    TAAGTAGTAA CCAACCCCAG AGAGACCTAA TCGATCGCAA TTTCCTCTCT 
    TTCTCATCAG CAAGCCATCT TCAATTTCTT TTCTCTCTTT TTACTTAGAT 
    CACTCATGAT CTCTATTCCA CTTTTCAAAT CAAGTAATCT ATTTGTGTGT 
    GTTCGATTTA TGAAGAATAA CAACAAAATC GCTTTTCGTT GTTTGGGGGC 
    ATGACGATGA CAAGGGAAGG CTCGCCGACA AAAACACTCT CTGATTTCAA 
    AAGGTATTTT TTTCTTCGAA TT

AT1G01695.1

Model type
Protein coding
Short Description
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Computational Description
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G00440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01700.1

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 2
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 2 (ROPGEF2); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 3 (TAIR:AT4G00460.2); Has 308 Blast hits to 304 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR