Home
Mutant Lines
15-4484-1

15-4484-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 7647613 [Map]; Strand: c
  - AT1G21750.1 - [+] show detail - PDI-like 1-1
    Distance: 0; Region: exon6 (CDS)
  - AT1G21750.2 - [+] show detail - PDI-like 1-1
    Distance: 0; Region: exon6 (CDS)
Flanking Genome Sequence: 15-4484-1 - 5-prime edge
```
TTATAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
CCATCCTACT TTCATCCACT TCACGGTACT TTGATTTAAG AGACTCAGCT 
CCTTCTCCAG TGAAGTTAAT GAACAACATC GCCTGAAAAT CAAAATATTG 
CAGAGACTGA GGATTCTTGA AGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 7647620 [Map]; Strand: c
- AT1G21750.1 - [+] show detail - PDI-like 1-1
  Distance: 0; Region: exon6 (CDS)
- AT1G21750.2 - [+] show detail - PDI-like 1-1
  Distance: 0; Region: exon6 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
TGCTACATCC AACAAGGGAC AGGGTCTTAG CTTCCTTCTA GGTGATGCTG 
AGAACAGCCA AGGTGCATTC CAGGTTAGTC TTATTCTTCT ATCTTCAATC 
GTTTATCTCC AAGGTAGCAT TGGTTTCAAA TTGCTGAACA CATTTCTCTC 
CTTTCTAAAC CATTAACAGT ACTTTGGACT CGAAGAGAGC CAAGTTCCTC 
TCATCATCAT CCAGACTGCT GACGACAAGA AATACCTGAA AACAAATGTT 
GAGGTTGACC AGATTGAATC ATGGGTCAAG GACTTCAAGG ATGGAAAAAT 
TGCTCCCCAC AAAAAATCTC AACCTATCCC AGCCGAAAAC AACGAGCCAG 
TGAAGGTTGT TGTTTCTGAC AGCCTTGACG ACATTGTCTT AAACTCTGGA 
AAGAACGGTG AGTTACTTTA CATTGTTAAA TCACAAATAC CTGTTTGCTC 
GTAGCAAAAA CTTATAAATC AGTTTTCATT CCTCCTATTT ACTTGCAGTT 
TTGCTTGAAT T

AT1G21750.1

Model type: Protein coding
Short Description: PDI-like 1-1
Curator Summary: Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description: PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 31573 Blast hits to 17834 proteins in 2924 species: Archae - 337; Bacteria - 15428; Metazoa - 5451; Fungi - 1644; Plants - 2422; Viruses - 29; Other Eukaryotes - 6262 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21750.2

Model type: Protein coding
Short Description: PDI-like 1-1
Curator Summary: Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description: PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink).
Link: InterPro Scan - TAIR