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Mutant Lines
15-4531-1

15-4531-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 23450734 [Map]; Strand: c
- AT3G63500.1 - [+] show detail - Protein of unknown function (DUF1423)
  Distance: -539; Region: promoter
- AT3G63500.2 - [+] show detail - Protein of unknown function (DUF1423)
  Distance: -536; Region: promoter
- AT3G63510.1 - [+] show detail - FMN-linked oxidoreductases superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT3G63510.2 - [+] show detail - FMN-linked oxidoreductases superfamily protein
  Distance: 0; Region: intron1 (CDS)

GTCCGATTCN NATNNACGTN AGANATTCCT CGAGNTTACC ATGCCCGGGC 
NGCCGACNAN GCGNGNCNTA NAGCCCTGAG TCTGAGAGAG AGCAAAAAAC 
CTGAAGGAAG GAGGAAGATA GGGAGACGAA GTGGAGGAGA ATCTAGCAGT 
GGGTTTGAGC ATTGGGGACT TGAAGAACAT CTCAGAGACA TTTGGTCGAA 
CAGATGGTAG ACACCACATT TGGATTGGAG AAGATAATGA AACCGTTTGT 
TTGGAACTAG CATAACAGTA AGGGAACATT AATAATGTTT AAAGTATATA 
AGTAGTTGTG ATGGGCCTTA CTTTACGCAT TTTATATCTA TGATGGAGTA 
GGAAAGGGAC ACTGATAGAG CCCAGCAACA AGTTGTCTTT AGTTTAATAC 
TAATTATTTA ATGCTAGTGG TGGAGGATAC GACGACACGC GATAAGAGTC 
AAAGATTGGA CTAGCAACGA AAATGACGTA AACACCCACG TTCTCTGGTC 
TTTGGGAGAT GGCAGATGAT GTAAATAAGC GAGTAAAGGG AGGGCAAAGG 
GAAATGGTGC TTTTCCCACT CAGTTTGACT TGTAATATTC CTTTTCGTCT 
TCCTCCTCCT TGCTTGCTCC TTCCTCGTTG CGTGATTCCT TGGTATATAA 
AAAAGGCAGC TTGAAATCTG CAAGTTAGGG TTCTTCCGAC ATGAATCTTG 
CCCCAATCTT NAGGTACTCT CTTNTATT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23450847 [Map]; Strand: c
  - AT3G63500.1 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -652; Region: promoter
  - AT3G63500.2 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -649; Region: promoter
  - AT3G63510.1 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT3G63510.2 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 15-4531-1 - 3-prime edge
```
GATTGGACAG ATAATCATTA CCGGACGCTT GCTCGTCTCA TAACAAAGCA 
CGCTTGGCTT TACACTGAAA TGATTGCAGC TGAAACCCTT GTTCACCAGC 
AGACCAATTT GGTAGACTAA TTTTGTTTTC TTAAATTTGT GTCGCATTGA 
AGAATCTCGC TAGACATGTC CGTTCTTCTG CACTTTGCCT CAGGACAGGT 
TCTTAGCGTT TTCTCCCCAA CAACATCCTA TTGTTCTCCA ACTTGGTGGT 
AGCAATGTGG AAAACCTTGC AAAGGCTGCT AAGCT
```

AT3G63500.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1423)
Computational Description: Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 795 Blast hits to 695 proteins in 144 species: Archae - 6; Bacteria - 39; Metazoa - 207; Fungi - 61; Plants - 263; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63500.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF1423)
Computational Description: Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 3195 Blast hits to 2635 proteins in 392 species: Archae - 10; Bacteria - 381; Metazoa - 1310; Fungi - 308; Plants - 351; Viruses - 11; Other Eukaryotes - 824 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63510.1

Model type: Protein coding
Short Description: FMN-linked oxidoreductases superfamily protein
Computational Description: FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11920 Blast hits to 11916 proteins in 2583 species: Archae - 58; Bacteria - 8071; Metazoa - 278; Fungi - 218; Plants - 160; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63510.2

Model type: Protein coding
Short Description: FMN-linked oxidoreductases superfamily protein
Computational Description: FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink).
Link: InterPro Scan - TAIR