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15-4545-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28030271 [Map]; Strand: c
      • AT1G74630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -250; Region: promoter
    Flanking Genome Sequence: 15-4545-1 - 5-prime edge 
    CACAAGGGAC ACTCATGTTT TATAGTTTTG TGTTTCAATT TGGATGGCAA 
    TTTAGTAATT TTGTATAATT TCCGTTATCA AAATAACAGA ATGTTTAACT 
    GTATATTCAC AAGGCAATTT AGCCACTATT GATCCTTGTG TGTAACCATC 
    CATGCAAATC ACACATTCAT TCTCCTCCTC CTCCATCGTC CATACGTTCG 
    AATTATATCG AAGCAACTTA ATAGCCGATG AATTGGAGCA GTAGCTCTCG 
    AATTGTACCG AGAAGGGTTA ATTAGTTATA TCCTTTTCCC ACTCGAATTA 
    GGATTTTAAT TTAGGCCTTG AATTGAAGTT GTTTTTGGTT TTTAACCTTT 
    TTACTTCTTT TTTCTTCCAA AAATCTACTT TATAACCAAT CAATTATGAA 
    AAGAATGGTT TTTTCTAAAA ACAAAATAGG GAATCTATAG ATTTTGATAG 
    TTTTGTCAAC TTTTTTAAAA AAACTAAAAT CTATGTTTCA TGGGATTTTC 
    TTTTTATTTT AAATCTTTTT CTATATACAA AATCTAGTTT TTGGTTTTAG 
    TTTTTCCCAA AATCTATTTT ATACTCATTC AAGATTTTGA AAAAACAAGT 
    TTTCCTAAAA AATAAAGAAT CTAGTTTTTG AGTGGTTTTA ACAATTTTNC 
    AAGAAAACTA AAATCTATGT TTTGGGGAGT TTCTNTTTCA AAAACCATCA 
    ATCACATTTT TTTATTTTAA T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28030387 [Map]; Strand: c
      • AT1G74630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -134; Region: promoter
    Flanking Genome Sequence: 15-4545-1 - 3-prime edge 
    CCCTTGTGCC GATTTCGAAT GTCTCATTCA TCATCTTGTT CACTTTTTCT 
    TTGGATTTTC GATTTGTAAA ACAACAAAAA GAAAGATGAG TTCTTTCTTT 
    TTTCAGGGTT TAATTAGGGT TTATGAGCTT TCATCTGGAT TATGATAAAT 
    AAAAATTCCA GCTTATATTT TTTTTTGGTT TGNGACGATG ACTATAGCAA 
    TTCACCATTG TCTCTCTCTC CTTAATAGCT GCAANAACTT AANAGCTTTA 
    ACACAAATAC ATGGCTNGTT TATTAAATAC GGCGTCNACA CTGATTCTTA 
    CTTCACTGGA AAACTTATCC TACATTGNGC NATTTCTATA TCCGACGCTT 
    TACCTTACNC TCGTCGTCTC TTGCTCTGTT TTCCTGAACC TGATGCGTTT 
    ATGTTCAACA CTCTCGTCCG AGGCTACTCT GAATCCGATG AGCCGCACAA 
    TTCCGTTGCG GNGTTTGTTG AAATGATGAG GAAAGGTTTC GTCTTTCCGG 
    ATAGTTTCTC CTTCGCGTTT GTCATCAAGG CGGNGGAGAA TTTCCGGNCT 
    TTAANAACTG GGTTTCANAT GCATTGTCAA GCT

AT1G74630.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 36912 Blast hits to 14171 proteins in 263 species: Archae - 0; Bacteria - 21; Metazoa - 80; Fungi - 95; Plants - 36068; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink).
Link
InterPro Scan - TAIR