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15-4587-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23063739 [Map]; Strand: w
      • AT1G62360.1 - [+] show detail - KNOX/ELK homeobox transcription factor
        Distance: -2017; Region: intergenic
      • AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -8836; Region: intergenic
    Flanking Genome Sequence: 15-4587-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGA 
    GAGTTTTTTT CTTCTTTCAT GGGGAAAGTA AAACTTTGCC TTGAAGATTT 
    CTCTCTTCAA TATTTTTCTA AGACTTTTGA TTTCAACGAA TCACTGTCCT 
    TAACCTAAAA GCAAGAAAAA TTAGCTTTAT ACNTGGTCTT TACTTTTTTT 
    TTAACATATT TATTTTTATA TAGTTTACTT ATAAACATAG ACATACGAGT 
    ATGGGAATAT ATAGTATATC CAACTTCTAA ATAATATTTC GAATAGTGAT 
    AACAAAATTA GCAATACATA CGGCTAGTGA AATGTTGATC GAATAAACGG 
    CACTGATGTA ATGTACTTAT CAATTTTGAT AATTTTAATT GTATTGTTTT 
    TCTTTTTTTC CCACAGTATT GAACTAGACA ATTAAATTTA AAGTAAAATT 
    ATACATTTCT TTCGTTGNGT ATTAAAGTAA CATGCATAAT ATCATTTTCC 
    TTCGTACAAT CCTCCAAATT GACAATTGAT GAATTACTTT GTCAATCGTA 
    AATGAATTTT TCTCAAGTCT GTATACTATT TTCAGGGATA AACAGGTACA 
    GGTGTCCCAT GCTTATTCTC TNGATAGTAA CATGTGTCCT ATGTTGAGTC 
    AATTCTACGT TCGAAGAAGT GCTAACAATT GTTAATAGCC TCGTNTATTA 
    TTCCTAATTA AAATGCCTCG ATAGATTTGG GTTANGGGGN CTGAATGTGA 
    TNGGGTATTT TTTNCAAGTG GCANGAGGNC TN

AT1G62360.1

Model type
Protein coding
Short Description
KNOX/ELK homeobox transcription factor
Curator Summary
Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.
Computational Description
SHOOT MERISTEMLESS (STM); CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1); Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0; Bacteria - 0; Metazoa - 1706; Fungi - 298; Plants - 3900; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62370.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 610 Blast hits to 610 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 27; Plants - 270; Viruses - 11; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR