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15-4665-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: 15-4665-1 - 5-prime edge 
    GGAAAAANNT TNAAACTTTN ACCTTAACTT CTGTTGCGAT TTCAATCCAT 
    TATGAATCGA TATTATTACA TATCCAATCT CCTTACCAAT ATNCCTCAAG 
    GAAAATCCCG AATTGGATCA CCAGCCGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23130087 [Map]; Strand: c
      • AT3G62520.1 - [+] show detail - transposable element gene
        Distance: 2846; Region: intergenic
      • AT3G62528.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1395; Region: intergenic
    Flanking Genome Sequence: 15-4665-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGC 
    TAATGTTGAC TTCAATGATG TGAGATTAAT TTTATGTGCG GTTGTGTTAT 
    TTTTATGTAT AAAACAAAAA GTTATATGTT AGGGTATAAA ACAATGATGT 
    ATAAAACAAA AAGTAGAATG GGTTATCTAA TTGTTGTGAA AAAACGAAAG 
    AGAGAATATA TATTTTTTTT TNCTTTTNNA ATTNGNAATT AAGNCCCGCC 
    CTTATNGAAA ATTNATTTTT ATTAATTTTC CAAAGGGNCC CCGGCGTNTN 
    TGTNATNTCC AANGTNTNTT TTTTTTTTNN NANGGNNNTT TAAANNTNNA 
    AANGGGGGGG AANNGGGCCC CNCCCNNAAN CCCCNAANAA ANNTTTAAAN 
    GGGGGGAANN GNNTCCNNCC TNGGCCCAAC CGNGNCCNAT NNCCCNAAAA 
    AATNGNNNNT GGGGGGNAAA NGNGNCCCNC CCCNGNCCCN AANNGCCCCC 
    CCCTTNCCCC TAANAAANNC CCCCNTTNGG GGGGNAANGG NGGCCCNTAA 
    ANNCCNNGNN CCCCCCCCCC NNGGGGNNNT NCCNNACNCC TNNNNCCCAN 
    NTNNCCNNCC CNGGGCCGNN NNNNCAGCNC TNNCCCC

AT3G62520.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 1.1e-86 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays)
Link
InterPro Scan - TAIR

AT3G62528.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR