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15-4675-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 409019 [Map]; Strand: w
      • AT5G02070.1 - [+] show detail - Protein kinase family protein
        Distance: -799; Region: promoter
      • AT5G02080.1 - [+] show detail - DNA / pantothenate metabolism flavoprotein
        Distance: -792; Region: promoter
    Flanking Genome Sequence: 15-4675-1 - 5-prime edge 
    GTATTCAAGA TCCAAAGTTT TGCACATGCA AAGATTTTAA GTTCATCACA 
    TATTTTATTT TGTTTGTATT CGTTGTTACA AACTTTAACA CGAGAAGCGT 
    CCGGTCCCAT TACNGGAGTT ATGTAACCAA GTTTAAGATA CCGTTCCCAC 
    TTCCCACACC ACTGGAAAGC CACAATAACC CCTTAATTAC CCCTATAGCT 
    ATATACTTAT CAATTAAAGG TAATTGCATA CGTCAAATTA CATAGAAATG 
    TGAAGTATAT GATATTGAAA TTGTGTTTAG ATAGAATAGT ATCGCCATTT 
    TCTCAAGAAA AAATAACGAA TGATTATTAT TGTTCACACT TCTCAACTAT 
    TTCATCTATA CTTATATAGT TAAATCATAG TTTTTCAAGT CAATAAAAGA 
    TGTAATCATC ATGATCGCAT AAAATCAGTT ATAGATTCTC GGAATCAACT 
    TCGTAGGTTA AAAAAGAATG CACAAGTGTT GGTTGATAAC GCTTGACAAA 
    AAGAAAAAGA TAATGCATAA GTGACACAAA AGACATCGAC ACAATCTGGC 
    AAAACAGCAA TCCAAAACTC ACTATCTCAG GTACTTTCTT GATACAAATA 
    AAACTAAAAG CGTACAAGTG TGAGTTTATC ANAAACAGAT GTCCATAGTT 
    GCAAAAATAT AAACTTTGNG ATTATATGGG CCGTTTCTAA GGCCCATTAG 
    AATAGCTTGA TCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 408895 [Map]; Strand: w
      • AT5G02070.1 - [+] show detail - Protein kinase family protein
        Distance: -675; Region: promoter
      • AT5G02080.1 - [+] show detail - DNA / pantothenate metabolism flavoprotein
        Distance: -916; Region: promoter
    Flanking Genome Sequence: 15-4675-1 - 3-prime edge 
    ATTGTTCATG CCTTATTCTT CTTCTTCTTC TTCTTCTTTT TTTTGTTCCT 
    TAGTGTTTGT TAAAGTTCGT AATATATCTT GGAAGATGTA TATGATTACG 
    GAAAAAAAAA CTTATAATAN ATTTACTAAA AACATGTTCT ANAAAACTAT 
    ATACNNGTCA CACNACTCCC ATTTAAATTC TTAAGTTTTT GTATCTATAC 
    GGATAAATAG NGAAAGATGT GATACAACAA TTACTAAAAT TCTTTTTACA 
    AATCAAAAAA TCTACCANAA TTTTTTCTGA ATAGGCAATT ACTCGTCCTC 
    AACCAAAATG AATAANANAT GTAGNGAAAA TTATACTTGT CNAAAACGGN 
    CCAGTCTAAA TNGATAACAC AAAATCGAGT AAAAAATGAA CAGTCAATAA 
    TACTNGTCGT TGAATAGTAA ANAAAAGTAN AAAACTTAGG AAACATGAAA 
    ATGTCGGGAT GATCATGACA NACAATGAAT CTGCACAATC TTCCTTANAA 
    AATACAAACA TGATTTTGAG AAAATCCAAA CCAATCCTCA CATTTTCTCG 
    TTTCAAAACA ACTCGGGAAT TGCTTCTGTT TACTTTACTA AGATATACGT 
    AACAAATGTN TAACCCCNGC ATTACCNTAA ATAAATAATA ATGACCTTTC 
    NTTAGTACAT AACCCTAAAC CTTTACTCAC ATCTTTTGAT CACTAATTGN 
    CCACCCTCTT AATTAGTTNT NCAACAAAAN GG

AT5G02070.1

Model type
Protein coding
Short Description
Protein kinase family protein
Computational Description
Protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53840.1); Has 114140 Blast hits to 113200 proteins in 4569 species: Archae - 121; Bacteria - 12456; Metazoa - 42740; Fungi - 9504; Plants - 32338; Viruses - 412; Other Eukaryotes - 16569 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02080.1

Model type
Protein coding
Short Description
DNA / pantothenate metabolism flavoprotein
Computational Description
DNA / pantothenate metabolism flavoprotein; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: 4-phospho-panto-thenoylcysteine synthetase (TAIR:AT1G12350.1); Has 1189 Blast hits to 1160 proteins in 540 species: Archae - 65; Bacteria - 597; Metazoa - 129; Fungi - 134; Plants - 69; Viruses - 5; Other Eukaryotes - 190 (source: NCBI BLink).
Link
InterPro Scan - TAIR