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15-4680-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7966680 [Map]; Strand: w
      • AT1G22550.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-4680-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TTCACTGCCA TTGGGTTCTT GGCGTTTTTG TTATTATCCA GGCTGTATGT 
    GTATCGCCGT GTAGATCAAG TCTAAGAAAA AAAAAGTCAA CGTGTATCTA 
    CTTTCATATC ATATTTGGTT ATTCATAACG TGGTTAGAAA CTCTTTAACC 
    TATTTTTTAT TCAACAATTT TAGTTTATTA ANATGAAATC TCTGGAAGTT 
    AGCTTGGAAC ACAGCTGGAT AATATACACG ATAAGGAAAA GACTATACAC 
    CAAACATGAA AAAATATACA TTCACTGGTG TTGAGCCATG TAATGGTAGG 
    GACGTGGAAN ATGCNATGGA TTTGGCAAAA GAGCCACATG ATCAACACGA 
    TNTACCAGAC ATGAAAAGTA TACATTTGCA CAGTAATGAT TTGTGTATTC 
    AAAAATTACA CAAGAGAGGG AAAGAGAATA CCTGCGATAT TTAAACNANA 
    GATTTTGGGT TTAACTGGNG TCNAGCCTTT TAAAGACGTA AGACTTTGCA 
    ACATACAAGT AGGAGGCTAA GCCAATGAAG CTGAGACAAG CGAGTAACCA 
    GTAAAAGTAA TCGAGATGAG CTTGGTTCAG GTTGTTTGCG AACCAACTCG 
    CTTGACCANA TTGGCTTGTC GCTTTCTCAA TGATTGATAT CATGAAACTG 
    CTGANAAAGT TACCAATACC GAATATGCTC AGTCCAGAGC CAACCCCNCA 
    CTCCTNANCT NATTCGGGAC TTGGCATAAA AAAACTCTTG AAACCN

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7966683 [Map]; Strand: w
      • AT1G22550.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 15-4680-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA AAGCAGCAAG CAACCAGTAA AAATAATCGA 
    CATGGGCTCT GTTCAGGTTA GTATTGAACC AGCTATCGCC GCCATTTTTC 
    CCGGTAGCCC AATTAATCAC AGTGATTAGA AAACCGCTCA AGAAGCTCGC 
    AAGACCCATC GCACTCAAAG AAAGTGCAAG ACCAATACTC CTTAGCTCCG 
    TGGGGACTTG GTCGTAGAAG AATT

AT1G22550.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22570.1); Has 7743 Blast hits to 7641 proteins in 1463 species: Archae - 0; Bacteria - 4037; Metazoa - 494; Fungi - 461; Plants - 2187; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink).
Link
InterPro Scan - TAIR