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15-4708-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5701944 [Map]; Strand: c
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: exon29 (CDS)
    Flanking Genome Sequence: 15-4708-1 - 5-prime edge 
    CCATTGAGCT GTTGCCACTG GAGGAAACAG TATAGCAGGC TTTGCGTCAG 
    TACCAGCAAA GAGTTGCCTT CCGGATTCCT TGTTAGTATG CCCAAGTTCT 
    ACCAATTCAC TGAAGAAAGG TGCCACCCAT GTCAAATCTT GTTTGTGTGG 
    TTACTATATA CATCTACATA AAAAGAACTT TCGAGTTCTC TATAGCTCAC 
    TAACCGGTTT TCATTTTGCA TCATATCTCG AGTCACTACT TCTAACATAT 
    CTTGCAACAA TAGCACCACT GTGTCTCTTT TCGCTGGGTC CGCATTTTTC 
    TGCAGCATCA TAAGTATACA TAACTATTTA GTTCCCTAGA TAACATTTCA 
    CAAGTATTAT CCCTTCCAGC ACAACATTAA TAATAAACAG ACCTAAATTA 
    GGGGATTGCA CTGTCTCTGG CATAAAAAAT AACCAGCCTT AAATCAATAC 
    CAATGATTAA ACAAGGATGT TGTTCACTTA CCAAAATTCC AACAAGCTCG 
    ACAAATTTAC TACAAAGAGC AGGTAAAGGC GCCATTCTGA AATTCGAAAG 
    GAAGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5702060 [Map]; Strand: c
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: intron29 (CDS)
    Flanking Genome Sequence: 15-4708-1 - 3-prime edge 
    CTCAATGGCA TGAACAGGTA AAATCTCAAA ACAAATTATA AGGCTAATTC 
    TTAGAGATAC TCTGTATATA ATGATCTAAT TCATTGTTGT AGATAAGTCG 
    CCTTCATTTA CTTTTGACGG TAAAAGAATC TGCAATGGAT GTTCCAACAA 
    ACCTTGAAGC ACAAAGAAGG ATTGCCTTCT TCACAAATTC ACTGTTTATG 
    GATATGCCAC GAGCTCCTCG TGTCAGAAAT ATGCNTGTCC TTCAGGTATG 
    TGCTCTGGTT ATCACTATTT TTGAACAGAA TTTATGCTCC TTTGAAGGAT 
    ACCATGTGCT ATCTATATTC TCCAATTTAA ATTTTTCTAC AATTGAGGGA 
    TC

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR