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15-4725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 284718 [Map]; Strand: w
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-4725-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    CCTTCCCCTA ACTCTTTAGA CTATGTACCA AGCACAACCT TTTCCGTGTT
    TTCTTTTTTG ACTTCTTGTT GCAGATATCA GTCAGAATCT CCTCAATGTC
    TACAGTATCA TCTACATGCG TTTTCAACAA GTTACAACTA TCCAAAAGGC
    NTGAGTTCTT GGACAACACT TGGGGCAAGA GAAGTATCAT CTTCTACTCT
    TTTTCTTACA TACTCCATTA GCACAAGCCC TGCAAGATAC CATATGATTG
    TGTCACAAGA TCAAAGATGA ATAGCTTCAC AATAACAGAT TTCAGGATTT
    AAAAAAACAA AAAGTGTCGG AAGTTAGAAG ATAACCGAGA GATCGGAGCA
    TCTTAAGATC AAATTTGTCA GCTACTAGAT CTTCGAGACC ACTTACTTTG
    GCACGTCGAA TGACTAGCTT TTTTAAGCTG ATGAGCAAAT CCTGAAAAAA
    TGATTGATCA ATGTTAGTTT TTGACTGCAG AAAGAAAGAG AATGATTAAA
    CAATATTTAC CAGTTCAGAT TCTGAGAGAG AGCAAAACCA AGTGAGATCA
    TCGGTCCTAT TGTTCTTCAA GATTTGGCTT AATTCCTCCA TTCACTGTTT
    GAAAACAAGA ATCCTATATT ACTAAATTAA TGGTTAAGAT AAAACCTTAG
    CTAACAAGAG GTAAGCAAGA ATT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 284726 [Map]; Strand: w
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-4725-1 - 5-prime edge
    CTTTAAANCA ACCAAAATCG GTTATTCGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTGGATAATA TTCCATGCCA AATACTTATA
    TGCATTTCTT TCGTGTTTGA AGGAGCCGGT AGGAACCAGC CTGCTGCGAT
    GGACAAGTAA CAGTGAGAGA GGGTTGCAAA ACCATGAGAC AACAGTTTTT
    CCATACAAAG GCTGTTGGAA AATCAATGTA CGTTACTTTC CTTGCATCTG
    GTTCCGACTA TTCATTTTCA TCCACTCCAA AATTATTGTC TGTTTTAAGC
    ATCTTTGTTT TTTTTTTTTG GGNNNGGGTT TAAANNTTTT TGTTNGTTNN
    NAAANATCTT TTTTTTTTTT GGCTTTNCAG NAGTTNGTNC CNCNNCCCCN
    CAAAANNTTN NANCNNGGGN AANNTTNTNT TTNACCANGG GTTTAAAAAT
    NNACNGNNNN CTTTTNAAAA TNNTTTNTNG TTGGGGGGAN NAAANCNNAA
    AGGGTNNAAA AAAANTTANT NNAAATGGGN NNAAANCTTN NNNTNCCAAA
    ANTNCNGGTT TTTTCCNGGT TANCCCTNAC CCANCCTNNA ANTGGGAAAN
    NANTTTTTTN ANTNANNANA ACCCCTNGAA AAGTTAANAN AATNNTGGNT
    AACCCGNTTT CCANNNAAAA ACGNNTGGCA ANGGNNATCC CTCNCCNNAT
    TNAAAAAAAA ACNAATTTTA TTNNTTTTNA ANAAAAANCT TAAANNNTTT
    TNNGGGATTT TNAAACNNNN AAANAACCCT

AT4G00695.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3).
Link
InterPro Scan - TAIR