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15-4775-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8978459 [Map]; Strand: c
      • AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
        Distance: 366; Region: intergenic
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: 3218; Region: intergenic
    Flanking Genome Sequence: 15-4775-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    TCAATCAATG AATAGTATAC AAATAATATG GGTCGTATCG TGTACTAGAA 
    TTTGTCTAAA ATTCCATTTC TCGTTTGTTT TCGTTTTGAG GTGTGTGGTC 
    CCCGTGGCCG AATATTCTGA ATTTCAAAAA AGAAGAAGCA TATATTTGTT 
    TTGGCATTTT TCATGCAACT GATTAAAGAA TCACAAGAAA AATGATTCCT 
    TACCAAATAC ATTTTCTTTT GAAAAAAATG ATATCAGTGC TGTCCAAAGT 
    ATATTCTCTG CCTTTTTAAA AAAAGTTTCG ATATTCTCTG CTCTTTGAAG 
    TTATCTTAAT ATCTTCTTGT GACAAAAAAA GTTATTGGTA TCATTCTTGT 
    AAAACGAATC GAACGTTTTT CATTTTGGTA TCATTCTTGT AAACGAATCG 
    AACGTTTTTC ATTTTCATGA TAATTTCACA ATATTTTTGT TCAGCTCACC 
    ATTATTTCAT TATATTATTC ATTACCCCAC CNTATATATC AATAATACAA 
    GTCATCACCA ATGTTAATGA CCTTGTTGAA CATATACTAC ATTACTATAT 
    CAAAAAATGT TCATGGGGTA TTCTAATGAA ACGNTAGTAA CGTACTGGGA 
    TNCNTTCAAT NNNATNANCA ATNNNAAGAA AATNCTTCCT TACNTTTNTA 
    TAAACNAATT CCNTGTNNAC NCCNNNCTAT TTTCCAANCG GGATNTTCNT 
    NNAACTACCA AAGACANNGA ANNCATNGTN AT

AT1G25550.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1641 Blast hits to 1637 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1615; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR