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15-4790-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7271722 [Map]; Strand: w
      • AT1G20900.1 - [+] show detail - Predicted AT-hook DNA-binding family protein
        Distance: -834; Region: promoter
    Flanking Genome Sequence: 15-4790-1 - 5-prime edge 
    TTCGCAAGCC ATATACTATA TATCTATTTT AAATTATTAT ACATTATATT 
    TTTACAAAAT TAGTTGACAA AACTAATAAT AATACTATAC ATGTAATTTT 
    TTTTTCTTTT CTTCTTCTAT ATAACTCACG TTCTGCATCC AGTTTGAATA 
    TGAATAATAA CATATATCAG CAGCACTATG CAAATCACAA GCCTACAAAT 
    ATCTAGTAAT AATGCAAGTT TATACTAAGT TTTACAATAA AAAGATGCNG 
    TAAGTAAATT AAAATTCTAA ATAAAATGAC CTATAGTAGT ATTTTCTCAA 
    GTAAGAGAAG ACTAAATAGT ACTATTTCTC ATTTTTACTT ATACGAAAAC 
    CTTTTAATTA AGTTACTAAA ACCATAAATA AATTAGTAAC ATGATAATAA 
    CATTTATCAA ATAACTTTNG TTTAAACATA ACCTCCACGC GCCTTAAAGG 
    GAATGTAGGA TTCGTTTTAA TCCTTGNGTA CCCAACTTCC ACTNGACATT 
    NNNNNTNTNN NCNTTNNNNG GGNAAAAANN NNNGNNNNTT TNANCNCNNG 
    NNNNNAAANG NNNNGGGNAA AAANAATNGG NNAAAAGGGN NNCNNNGGGG 
    GAAANNNNNN NNNAGGGCCN NAAAAAAAAA AAAAAAAANN NGGGGGGGGG 
    NAANCCNGGG NNNNAAAAA

AT1G20900.1

Model type
Protein coding
Short Description
Predicted AT-hook DNA-binding family protein
Curator Summary
Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.
Computational Description
ESCAROLA (ESC); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G76500.1); Has 2335 Blast hits to 2120 proteins in 205 species: Archae - 0; Bacteria - 577; Metazoa - 531; Fungi - 95; Plants - 869; Viruses - 15; Other Eukaryotes - 248 (source: NCBI BLink).
Link
InterPro Scan - TAIR