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15-4852-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584697 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4150; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1819; Region: intergenic
    Flanking Genome Sequence: 15-4852-1 - 5-prime edge 
    GTGTTCTCTG CCGTTTTGTT CCTCATGCGT GAGATTGTTT CTGATAGTTA 
    TGTTTTTCAG CTTGGATCTT TGTCATACAC ATCAAGATTG AAAGTAATAA 
    AGTTAGCAAG CAGGTCAGAT TTTGGCTATA TAAACACCTC TTACCAAGTT 
    TTTCTTCTTC TTGGCATTGA TTTTGTGGTT TCATTTTATG GTTTATGTGT 
    TGTATTTCAG GTGAAATTTT GGCTTAGTAG TAAGTCCAAG TAAGGGGTCG 
    TGTTTCTTGA CTCATGCTGA TATCTTTGAG CATATGACAG GTCAGATATC 
    TCTCACTCTA TTCTCATGTT TGTTGTGTCA TCTCGACAGG TTATTTGTAT 
    TTGAAGAACT GAGTCTTGGC TTGTTTTGGT TACTCACACT ATCGGAAAAC 
    ACACGTTATC TAGAAACAGA CACGTTCACA GACACGAAAA TCACTCAAAC 
    ACAATGCACT CAAACTCAAA ACACAAACAT AAACACTCAA AACTCAAACA 
    CTACCAAAAA CAAATCATAT CTCACGCAAA AAAACCTCCA AACACACTCA 
    AAGGTAACAA AAAAGCNGAA CATANCAAAA GAAACAAAAT ACAGCNCANC 
    ACANAACTAG ACNCANGAAA GAAAAAAAAA TCANTANCGN NNCGGNTAAN 
    ATCTTTTTTN NTTATTGGGA AAAACTTNNA AAACCGGNNG NAANNCANTT 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584813 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4266; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1703; Region: intergenic
    Flanking Genome Sequence: 15-4852-1 - 3-prime edge 
    GAGAACACAT TAAGATGATA AAAAGAGACT CCAATGCATC ATCTAGGCAA 
    CAAACATAAA TTGAAACAGT GATCGACTGA TGATGAAACA ATTTAAACTC 
    ATCTACTTGA ACAAATAACA GAGAAGTTTG ATGAAACAAT TCCATAACAT 
    TAAACTCTTA TGATCACTCT TTATAAATCC ATGTACGCGA TTATCCTAAT 
    TGGTAGATCT CATAACCATC AAAAACAACT AAATTCCAAC AGAAATCAAG 
    CAAACAATTT CAAAACTAAA ACCCTAAATT CCCAAATCAA CATACACACT 
    GATCGAAATC TTGCGCACCT TCTTCAATTT GGTAGTACTA TCACACGATC 
    CAAATCCAAT CCGTGTATCC ATCGTTGGAT TATCACCGAC CCAAAATCGA 
    AACCCTTGGA TTCCGATTTG AACTAGCCCA ACGAATCAGA CGCCATTGAA 
    CATGAAATTC AATTGATCGG AGAAAAGATT CAGAAGAAGA TAGACGAACA 
    AAATCGCTTC TCCACTCAAA TTCAAACTCG TTTTGAAGAA ATTAGAAATG 
    AATTTTGAAA TTTGAATATT CGTTGACGGT TTATTTGTGG AAGAAGAGTT 
    TACGTTGCGA AAATCAGCTA TTTATGTGAT TCTTCGACAC AAAGAACACG 
    TAGATTTACG ATTATGCCCT TATGCGTATA TGCTCGAACG GGATTATTTT 
    TCAAAATTGG TGTTTCCCGC TT

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR