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15-4889-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • abnormal (PATO:0000460)
    (Seedling::abnormal shape)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 255542 [Map]; Strand: c
      • AT4G00600.1 - [+] show detail - Amino acid dehydrogenase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 15-4889-1 - 3-prime edge 
    CCTGCAATTC ATATTACTTT CACATACTGT ATTTGATTTG ATCATTCATT 
    ATATTACCAT ATGTCAAAAA ATTCCACTCA CCTCAACAGG TTTAATACCA 
    ACATCGATGA GGACTGCACC CGGTTTTATC CAGCTTCCTC TGACCATGTT 
    TGGTTTCCCA ACAGCTGAGA TTAGGATATC AGCTTGTCTT GTGAGTTCTT 
    CAGGGTTCAT GGTTCTTGAA TGGATAATGC TAACGGTTGC ATCCTCCTTC 
    TACATTTAGA AAATAAACAT CGATAAAGAA TGTTGTCCTA ACCAGAAAAA 
    ATGGCATATT GAAGAAGGAA TCATCATTAC CTGCAGCAAC AGAGCAGCTG 
    GCATACCAAC AATGTTACTC CTTCCAATAA CAACTGCTCT TTTGCCTTTG 
    AATT

AT4G00600.1

Model type
Protein coding
Short Description
Amino acid dehydrogenase family protein
Computational Description
Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR