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Mutant Lines
15-4982-1

15-4982-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7232388 [Map]; Strand: w
- AT1G20800.1 - [+] show detail - F-box family protein
  Distance: -788; Region: promoter
- AT1G20810.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
  Distance: 0; Region: intron1 (CDS)

ATCGGTTCGT CTTCCGCACA AATTTCACAA TTAGTGTTTG GAATTAGGTT 
TCTTTGTTAT TGCACATGAT TACTCTCTTG TTTAATTGGG TTTTGAGAGT 
TTCTGATTCG ACGAAATTCT GAATTGGGGG ACATAAAAGG ATTTGCTTGA 
CTTGTATGAG AAGTTTCTGG GTTTGTAAAA ACATAAACTT TAGCTTGTTA 
TTAACACAAT GTTTGTGTTA CTCTGTTCTT GCAGCTGAAG GGTTGAAATT 
CTATGACATT GAGGAAGGCA AAGGTCCAGT AGCAACAGAG GGATCAACTG 
CTCAGGTCTC TCTAGCTAAT GATTCACATT TTAATTTCTC TATATCGAAA 
TCGAGTTCTC GCTTTTACAA TGTAATGGTG TCTGTATTTT CCACATTTAG 
GTGCATTTTG ATTGCCGTTA CAGAAGCATC ACTGCAATTT CTACCCGAGA 
ATCCAAGCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7232272 [Map]; Strand: w
  - AT1G20800.1 - [+] show detail - F-box family protein
    Distance: -672; Region: promoter
  - AT1G20810.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 15-4982-1 - 3-prime edge
```
GAACCGATAG CTAAGAAGAG AGCGAGGGAC TTAACGGCCA GTGGAATATT 
CCTCGAGAGG GATAACTTTT CTGCTACGTC TCTCTCTAGC TTCGGAAGAG 
CTCGGTGTTA GAACGAAGAA GCT
```

AT1G20800.1

Model type: Protein coding
Short Description: F-box family protein
Curator Summary: F-box family protein
Computational Description: F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20795.1); Has 109 Blast hits to 52 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20810.1

Model type: Protein coding
Short Description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G10060.1); Has 1763 Blast hits to 1744 proteins in 606 species: Archae - 0; Bacteria - 1027; Metazoa - 95; Fungi - 57; Plants - 263; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link: InterPro Scan - TAIR