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Mutant Lines
15-5001-1

15-5001-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 6945406 [Map]; Strand: w
- AT1G20030.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -19; Region: promoter
- AT1G20030.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -289; Region: promoter

CCTCCAACTC CAAGCCATAA AATATCATGA GAAAAAGAAA AAGAATCTCG 
ATTGAAGATT TTTACAATTT CTATGAAGAC AATAGTATGG TTGAGATTTT 
TTCTTGCAGC CGACCAATAA AAGGAGAAAT CTAGCAGGCT AATGTTTATT 
CTCTCTTTTC TTTTTGTCAG AGGCTCATTT GTCAGTAACC ATTTGATCAA 
CGGCTAAATC CTATATCCAC TAAAATTCAA CCACGTCATC AGACATACCA 
ATATACAGCA ACACTTGATA GCGGCTGATA AAAAGATCGT CAACAGAATT 
AACTCTTTAA ATCACTTCTC TGTTATACCT CTCTGTTTTG CTCCCTGAAG 
AAGAAGAAAC AGAGCGTTCA CATTTCTCTG CAACAAAATC ATGGCATTGA 
CCTTCTTCTT CTTGTTATCG AATTTGTTCT TCTCCGGTAA GAATCTGCCA 
GAAAAATCTC ACATATTTAA AGACTCTAAT TATTTTTAAA TTNCTTCATT 
TTTTTCAATC TTAGGAGTTA TGNNAAGGGG CTTNCNATTT TNNAACAAAN 
GNGGANNACN CANNGGGGGC GGGAGATTAA NAANGCGGGG GNNGNGGANA 
NNNNGNCCC

3 prime edge [+] show sequence

Chromosome: 1; Position: 6945252 [Map]; Strand: w
- AT1G20030.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -173; Region: promoter
- AT1G20030.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: -443; Region: promoter

GTTGGAGGTA ACATTATAAC CGTCATGAAT TAGTAGTCCA ACCCAAAATC 
AACTAACGAC TCAAGTATTC AAGTGTCCTA AGAAACCATT ACTTTGTTTA 
AATAGATGCA TAAAAGAATA AGATTGGATA TTGTTAAAGG ATTGGTTAGC 
TACCATAAAA TACAGATTGC TGTCAACTAA GGCAATTCAT TAACCATTTG 
TTTTTTTCCT TATCAATTAG TTAAAGAAAA TGACATTTTT TTTAGATGGA 
TAAATATCAA TGTGTCATTT AACTTAAAGC AAAATAATGG GAAGAAGTAA 
ATGATAATGA TTAAAGAACT CTTTTTTTAG TATAACATAT CTAAAAAACT 
TATCTTCAAA ATACAGAAAT TCGGAAGCGA AAATTACAGT TTTGTTCAGC 
TATACTTTGC TACAGAAATG TCAAAGGCTT TTTGATCAGT AGACTTCAAC 
GTTCCATTGC TCTGCCTTCT TCAACTGCTT CTTGTAATCA AACCAGGTCA 
ATACCTAAAA CCATCACAAA GTCATTAGAG TGTTATTGCT TATGCAATGG 
ATGTTTCAAG AATTGGAGTG TTATTTATTA GCTCTTCTTA CNGTCATTTG 
CAGCCAATGA GACCATATGN CATCAAATTC CTTTCTCCAT TCCCTNGAGT 
CCCCACATGT AAACNAAAGG TGNTGNCTTT CTTCACAACT CCCATTAATC 
ANCTGCGTNC TNGGGCCTTN CCGATCTNGG AT

AT1G20030.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 1614 Blast hits to 1596 proteins in 182 species: Archae - 0; Bacteria - 45; Metazoa - 56; Fungi - 77; Plants - 1416; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20030.2

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR