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15-5015-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5594224 [Map]; Strand: w
      • AT4G08765.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-5015-1 - 3-prime edge
    CGATNCTCTT CTATAACTTG ACTTGATCTC GGATCGAGCA GGCTTGCATC 
    TGGATCNATC GANCTTGTAT CTGGGAGTAA AAGAAACTCA CCCTGTCGAC
    TATGCGATAG NCTGAATTTG GACTGTTATA ATCATCTTCT CTTGCTAGAG
    CACTCTCAGA GTAAGGAAAA CATTCCTCCT AGAAAGCAAC ATTTTGGGAA
    ACAAAAATTC TTNCAGTTNG AAAATCCATC ACTAACCATC CTTTNTTTCT
    AAATTGATAT CCAAGAAAAA NACATCGAGC ACTGCGATCT TCAAATTTGT
    CATTCGAACG TCTTACTANC TTTGCATAGC AAAGGCACCC ANATATCCTT
    ATATCATCNT NANAAGGAGG ATTCTGAAAT AATACTTNGT NTGGTGTTTT
    CCCTTTAAGN AGGATNGAAG GCGTNCGGTT GATCAAANGA ATANCAGCTT
    GATTGCTTTC TCCCCNNAAA NNANTTGGAA GCTACAAAAC CAGGCCGAGN
    ACCACCCNGT NCCCTTNTTT TTTTTTTNTN NTTNTTNANT NTTNNCNANA
    ANGTNTATNN GGANANNNNN NTANNGTNNT ANAGCGGTAN ATAATACTTN
    CCTTCNNNNN TNANTNNNNN GANANATNNN CNNANGGTAG NTNGTCNGTN
    ATTNCGNNTN NNTTNTNNNG NATNNGTCNG NNNNTANNAT TTNNCGNGTC
    NATTNCTTCN NNTNCGNNNG CNNNNCNNTN NANCGTNTAG NTCTGTTATN
    NNAN

AT4G08765.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.2e-158 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR