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Mutant Lines
15-5062-1

15-5062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 20482384 [Map]; Strand: w
  - AT1G54940.1 - [+] show detail - plant glycogenin-like starch initiation protein 4
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 15-5062-1 - 5-prime edge
```
GATGCGCGTG GAGGATTATT GGGTGTATAA GCCTTATCTC CCAAGGTTGA 
AGCAGAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 20482303 [Map]; Strand: w
- AT1G54940.1 - [+] show detail - plant glycogenin-like starch initiation protein 4
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGGCGC ATCACGCGCT 
CATCGCACGG GAAAATCTCA TGCATAGGCC CACATGAGCC GATGAATACA 
ACGTAGACCG CCTGATTAAC CGTCCTCAAC CCACTTTGGA CGGCTAGATT 
CGCTGCGGCC AAATTAACCT GAAGCCTAAA AACGTCCCTA AGCCCTTTAT 
TCGCCGACCA ACCATCACAT GGAACTCTAG CAACAATAAC GTCCACGTTA 
GCATCAGAAC CTTCTGGCTG AGGGAGAGGG ATCTCCGGAC AGGTAGAAGC 
T

AT1G54940.1

Model type: Protein coding
Short Description: plant glycogenin-like starch initiation protein 4
Computational Description: plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink).
Link: InterPro Scan - TAIR