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Mutant Lines
15-5131-1

15-5131-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 18756614 [Map]; Strand: w
- AT2G45520.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -312; Region: promoter
- AT2G45530.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATCGTGGCTC AGATGGCTTC CTAGGGTTTG TGGAAATCGG AGAGGGGAAT 
ACAGATTTGA GATGCAAAGT AGCTCCAGCT CCGGTGGTGA CGACCTTGGA 
AAAGCAGCAG CAGCCAGCAG CAGAAGGACC AAGNTNTNCC CAGAACAGAG 
CGAGTCAGCC AATGAATCGA ACCACCTCAC AATCGTTGTC TGCAATGGAA 
ATTCTAGTCN GGAANAATTG GNGGGTCAAA TCCCACCGGA TTAAGGGGGT 
TANCTTATNC CAAAACCGGA AGCTCCCCCC AANCANTGCC AGGGGTTTTC 
TACAAAANAA AAAAAAAAGG TTTTGAATTG NACCTAGGGT TNGNCNAATG 
NCNGGGGGGG GGCNTNGCTN AAAACCNCAA AGGGNTTTTT TAAAAAACCN 
TGGGGTTTCC NANCAAAANG GCCTTTNNCN NGGGGGGAAA AAANNTNCCC 
AATTTTNGNC CNNGNAAAAN NNCCNACCCC CCNNTGGGNA ANNCNNCCCC 
CCCCCCCNNN CCTTTTNTGN GNNTTNGNNN GGANTTNTTC NCNTNTTTTT 
TNANANAAAA AAAANNCCCN AAAAAAAAGN NCNNTTTTNN NCCCCNTNGG 
GGGGGNGNNN TT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 18756498 [Map]; Strand: w
  - AT2G45520.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -196; Region: promoter
  - AT2G45530.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 15-5131-1 - 3-prime edge
```
GCCACGATTC ACTATGGGAC CAGACGAAAA ACAGAGATTC AACTTTTTTT 
TACTTTACTT TGTAAATCTA TATGTTTTAT TAGTTCTCTG ATTTCTGTTT 
TGTTTCGACA CAAGTTAGTT AGTATTTAAT GTAATTGGGC CATAAATAAA 
TGGGCCTACA TAATAATATT GGGCCTAAGT AAATGGACCT GGGCCGAGTT 
CCGTCTCTTT CTGGAAGCT
```

AT2G45520.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G45530.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G60580.4); Has 964 Blast hits to 960 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 6; Plants - 589; Viruses - 3; Other Eukaryotes - 42 (source: NCBI BLink).
Link: InterPro Scan - TAIR