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15-5133-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 60491 [Map]; Strand: c
      • AT1G01120.1 - [+] show detail - 3-ketoacyl-CoA synthase 1
        Distance: -1324; Region: intergenic
      • AT1G01130.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR02066...
        Distance: 1414; Region: intergenic
    Flanking Genome Sequence: 15-5133-1 - 5-prime edge 
    CCTAAATATA TGAATTATTA GCATCTGATG AACTGGATCT TTCCAATATT 
    GAAGTTTGAG AGTTGGTATG CNGTACTGTT GAAACATGTG TTTCATGCAG 
    TAATCACGAT ATTATGGAAA CGACGTCGCT GCCTTTTGTC TTTGTTTTCT 
    TTTTCTCTAT TATTTCCCAG TAATCACGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 60607 [Map]; Strand: c
      • AT1G01120.1 - [+] show detail - 3-ketoacyl-CoA synthase 1
        Distance: -1440; Region: intergenic
      • AT1G01130.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR02066...
        Distance: 1298; Region: intergenic
    Flanking Genome Sequence: 15-5133-1 - 3-prime edge 
    TATTTAGGTT TATGTACAGC ATAATGAACA ATAGAGAGAA TTAATCAATA 
    AACAGATCAA AGTATTAATT TGCAAGATAA ATGAAATAAT GATGATAATA 
    AATGGTAG

AT1G01120.1

Model type
Protein coding
Short Description
3-ketoacyl-CoA synthase 1
Curator Summary
Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.
Computational Description
3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01130.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR