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15-5249-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6769277 [Map]; Strand: c
      • AT1G19560.1 - [+] show detail - pseudogene, putative CHP-rich zinc finger protein
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-5249-1 - 5-prime edge 
    CTTGGATGTG CGATGTGGNT CTATTTCTGA GCCTTTTATC CATGAAAGTC 
    ATCCTCTTCA TTCATTATAC ATCAACTATT CAACGGGAGA CAAGTTTTGT 
    AATACATGTG GAGATAAGTC AAATATGGTT ATGAGTTGTG AGCAGTGTGA 
    ATTTGTTTTG GACCTTAAAT GNGCTATTTT GCCAAAGATG GTTAAACATG 
    AAAATGATAA AGATCATTTT TTGTCTCTAT GCTACGGAGA AAAAACGAGC 
    GAGCCGTACT GGTGCGAGGT ATGCGAAGAA GAATTAAATC CAAAGAAATG 
    GTTTTATACA TGTGATCATT GTGCTATTAC TTTTCATATC AAATGTACCC 
    TCGGAGACTT CACATGGATG AAAACGAGAG GTGAANATGA GTCATCCCCA 
    GTTGTGTTTC TTAATAATCG TATGACTCGA CCAGNNCGGG CCGGNGACCN 
    NGCGGGGNNG GTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6769393 [Map]; Strand: c
      • AT1G19560.1 - [+] show detail - pseudogene, putative CHP-rich zinc finger protein
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-5249-1 - 3-prime edge 
    CATCCAAGTA TACATTACTA TAATCACTTT TGTACGTAAA ACCATTATGA 
    ACGTTTTGAC AAGCATTGCA AATGTTCAAA AAGCCTCCTG CGAGTCTTGT 
    GGTTAAAGTA ATTGGCATCT TGTAGAAGGA ATCTACTTTT TTTTTNGGCA 
    AATAANCCCA ATTTTTATNA AGGATNAAAT CATCACNTTC CATGCANCTA 
    TANAANGGGC TAAACAATAT AGGATNTGNG CNTACTTTAC NCCAAANGCA 
    ATCATCATTA TCACTTTCTT NTTTGANCTT TAAAGTNTNA CCCTNGNNAC 
    TGAAANGTTT NATCACTCCT TNTTNGATCA CTTCATATNA TCTANCCTNT 
    ACAATTTTTT NNGGTNTGCC TTCNAGTTCA ATCCTNTCCC AAATCCCGGA 
    CCTTGGGGCN CATNTTACNT GATAANCAAA ATTAGGACNT TTCAANCAAA 
    AATAACCCCC ANGNGNCCNT TTTATCTNTT TNTNACNCAC TCCACAGTNC 
    CAATTNCCNA CTTCAAAACA ANGATTNTAA NGAATNCGAT GATCTTGACN 
    ACNGATNTTT ATNACCCGNG GGNNTGTCAA CNCNCTTTCC GATGGATCAT 
    GAANTNGCNT GGAATACNTN TTTAAGGATT NGGATNGTNT TCCANNCCAC 
    AAACNTNACA AAAAAAANTN CTTNGNGGCN NAAAAAGNAG GGGAANGNTT 
    ATGNCCCTTA AGGGGNANAA AAANGAAAGG

AT1G19560.1

Model type
Pseudogene
Computational Description
pseudogene, putative CHP-rich zinc finger protein
Link
InterPro Scan - TAIR