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15-5251-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18438532 [Map]; Strand: w
      • AT2G44730.1 - [+] show detail - Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G44735.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G18...
        Distance: -91; Region: promoter
    Flanking Genome Sequence: 15-5251-1 - 5-prime edge 
    NAAAAAAANN TAAGNAACNG GCTAAAACTA ACAAATCGGT TATACGATAA 
    CGGTCGGTAC GGGATTTTCC CATCCTACTT TCATCGGAGA ATCCGGATCG 
    GNCATGGNTC AAAAAATTGA AGAAGAAAGA AAAAAAGACA GATCTTGTGA 
    AGGAAGAGAA ATGGCCTGTA ATGCGATGGC TTTTCGCNGG CNGGCGATTG 
    CACNGTAATA TCNGAGAAGA TAAGGGAGAG AGAGAGTGGA NGAGANGCGT 
    ATGATAATGG NGGGGGGGGG NNGATAAGGT TANATANANG CGTANATTAA 
    CAGANTNGGT AATAAANCCT TATGCGGTGG TNGCAGAGGG TGGNGGGNGC 
    ACNCCNTCGN GNACCACACG TGNAATAATA NANATNTTNN GATCNGNGNG 
    AAATAANATA GANAAAANGC NGCTGATNAA GCCNCAANCN NNGNCCCTCC 
    NNCCACGCNT NCAATNTANN GNGGGGNNGG GNNNAGTTNG NNTTNNNNCN 
    TCNNCNTNNN NNANNNTAGN NTNGNCNACA NNNNGNNGCN GGTGNCNCNN 
    CCACCNCNNG NNACGNNTAN NNTTTNNNNT AGGGCGNNNN CNTNCCNNNN 
    NANAACNNNA CNANNNAAAN NNNTANATCC CNNANCNATN CTANNNNNAN 
    TCTNNCNNTA TTNANANGAN ACACNAGANC NANNGGTNNN CNNCNNNCCC 
    CNCNNNNNCN GNNNNTNNGN TAANNCNANA NANNCGAGTN NNGNANNAAN 
    NNGANCCANN NNCCNNCGCN NGANNTCNNA NACAGNGNNA GAGNNNNGNN 
    GNGNNNNNCN CNANCGCNNN TNNCNNTCNT CNNCNGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18438451 [Map]; Strand: w
      • AT2G44730.1 - [+] show detail - Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G44735.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G18...
        Distance: -172; Region: promoter
    Flanking Genome Sequence: 15-5251-1 - 3-prime edge 
    CCTCCCGCCA CCAGTATCTT CCTCCGCTCA AGACGATGCC TCAACCGAAC 
    CAGCTTCCAA CACAGATCTG AAGAGCGCCT CCATCCCCAC CGCGTCCAAG 
    AACTCTAGGC GGTTACCTCC GCCGTGCTGG TCTCTGGAAG AGACGATCGC 
    GCTAATTGAC GCGTACAGAG ACAAATGGTA CGCTCTGAAC CGTGGAAATC 
    TAAAGGCGAA TCACTGGGAG GAAGTTGCAG AAGCGGTTGG TGCTAACTGC 
    CCCGACGTGA TTCTGAAGAA AACCGCGGTT CAGTGCCGTC ACAAGATGGA 
    GAAGCTCCGG AAAAGGTACC GTACCGAGAT ACAGAGAGCT AGATCTGTGC 
    CGGTGGCGAG GTTTATATCG TCTTGGGTTC ATTTTAAGCG AATGGAAGCT 
    ATGGAGAATA GACCTGAGAT TAAACAAGGT AACGAAAGTG GAGATGATGA 
    TGATCACGAT GATGGTAATT ACACAGCTAG GTATCAATTC AGCGGCGGAG 
    GAGGAGGAGC GAGGACGACG CCGAGGTTCT TTAATAGGAA TGGTACGGCT 
    GGATCTGGTG GTGGTGGAGG GAGTAGTANT ANCGGCGGGA TTCGAATT

AT2G44730.1

Model type
Protein coding
Short Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
Computational Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24860.1); Has 587 Blast hits to 557 proteins in 72 species: Archae - 0; Bacteria - 33; Metazoa - 106; Fungi - 10; Plants - 386; Viruses - 8; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44735.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G18720.1); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR