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15-5277-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7713116 [Map]; Strand: c
      • AT1G21928.1 - [+] show detail - Plant thionin family protein
        Distance: -603; Region: promoter
      • AT1G21930.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 15-5277-1 - 5-prime edge 
    TCCCNTCAAN TNAGAACNAT NCNNNAAACC AANNNNTCCC GTTNTNCGAT 
    AACGGTCGGT ACGGNATTTT CCCATCCTAC TTTCATCCCC TTTACGACGA 
    CGGNAAAAAN GNCAAATACC TCACATAGTC AGAATAAAGA TTCAAAATTG 
    CAGCCAANTT CTATCATGAA TCCTATGAAA AAAACCATTC CAATTCTTAG 
    AAACGAAGAT TACCTATCGA AGAAACGAAT ATTGAGCNTT NTTCCTTTGT 
    CGATTGTGGG GGGGGGCGCA NAANCGGGAC CCNNCGATNG TNTTTTTTTT 
    TTCCNNAAGN CNCCCCCCCC CNNANNCCNN NANTTGGGGG NCCCCCCCAT 
    TTTTNNNTNG NNCCCTNGNN NNNTTTAAAA AAAAAAAAAC CCCNCCTNTC 
    NNTGNCNTNN NTCNNNNCNC TTTTNTCTTT NCNNTCCCNN TTNCNNTCGN 
    GCGGCGNCGG GNGGNNGGGN CGNCCCNTNC TTNNCNNNGT TGTNCNCGGN 
    TNTNGGCGGG NGNNCGTNCG NNNTCNNNCC CCCCCCGCNC CGNCGCGCCN 
    CNCGNNNGGN CCCCNNNCNC NGNCCNTTTC GCGCGNCGGN CGTGCCCCNC 
    NNNCCNNNTT GTNTTNGTGN ATNGCGNNNN NGCCNNNCCT NACGCNCNNN 
    NNNNNAACNC NNCNCNGCNN CNNCACNGAN NNCNNTTTNG CNGNCTNCGN 
    GNTNNCANTT NCNGNTTNGT CGACNGGGTN NNCNGTAGCN TTNAATNNTN 
    CNATANGCNA GNGNNNTNGG TTNTATNNNG AGNTCTNNNN NTNNTCNCNA 
    AGCGNANNNG NAGNGNNTTT NCGCNNNCCN CCNCCCNNTN NCACAAAAAN 
    AANAAAAAAA AAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7713089 [Map]; Strand: c
      • AT1G21928.1 - [+] show detail - Plant thionin family protein
        Distance: -576; Region: promoter
      • AT1G21930.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 15-5277-1 - 3-prime edge 
    NATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCG 
    CCGGTCGTTG TTTCGTCTTA GGATTTGTGA GAATCATTGA ACAATTTTTC 
    AACTTTGACA ATTAATAACA CGAGAGGAGC TTCAGATTTA TGTGTTTGAG 
    TATTCAAAGA TATAGCTTTT ATATTTGCCT TTCTGGGTTT CATGGAGATG 
    AATCTGTATA CTTATAGCTC ATTAATTAGT CAACTCTGTT GTTGCTTCTG 
    GTTTGACATT GTATTGAGTA GTCAAAGATT TGAGCTTTCT AACTCCACAT 
    GAAGATATAG CGTGTTTACA TTTCATTTGT GAAAAGTACT TCAGTCCATT 
    TGGGTTTCTA TCTGGTTTAG AAGATATTTC TGGTGAAAAC TTTATTTGGG 
    CATTGCTTCT TTTCAGTGAC TGATCAAAGA TGGGAAGTCA GGAGAATGTG 
    AAACACCTCG AGGAATGCAC TGTTTCCAAG TTAGTTTCTT ACTGCATCAA 
    TAATGTTTGA TTGTTTGCTA ATCATTAGAA AGAGTAAGGA ACACATATTC 
    AGTCTTTGTT TCTTCACTGT GATATCGAAA TTTATCAGTA AGTCATTAGT 
    TATGTAGCCA CTTTTAGTTG TTTTCACTTG TTCACACCAT CATGGTTAAC 
    CACTCTATTG CTTTTCATTT GGAAAAAATA AGTAACCTTG GAATATAACC 
    ACGGNTGNTG GTTNGATACG TCNTTGCTTG TTAAAACACT TGAGTGTNGA 
    AAGGNTCA

AT1G21928.1

Model type
Protein coding
Short Description
Plant thionin family protein
Curator Summary
Encodes a Plant thionin family protein
Computational Description
Plant thionin family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Plant thionin family protein (TAIR:AT1G21925.1); Has 75 Blast hits to 75 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21930.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR