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15-5302-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12293556 [Map]; Strand: c
      • AT4G23560.1 - [+] show detail - glycosyl hydrolase 9B15
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: 15-5302-1 - 3-prime edge
    GATATATGTT TAAAGCAAAC GATACATCCC CTGACTAATT ATTTAAGTTT 
    GTAGTCATAA TAGTTTGTTG ATGAGTAATG ATTCTTCTTT GCTAATATTT
    GTTTCCCCAC AACCAATCTA AACGTGAGTT TATCCGGAAG AACTTGATTA
    GAGCTGCAAC AGGTCCAATA AAGGCGGCGT TGATGTAAGT TGTGGGCTCA
    GCATGAGAGT AATCTGATTT TTTGTCGCTA TACTGATCGG ATGAATT

AT4G23560.1

Model type
Protein coding
Short Description
glycosyl hydrolase 9B15
Computational Description
glycosyl hydrolase 9B15 (GH9B15); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B14 (TAIR:AT4G09740.1); Has 1874 Blast hits to 1863 proteins in 270 species: Archae - 2; Bacteria - 707; Metazoa - 184; Fungi - 17; Plants - 921; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR