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15-5310-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7890329 [Map]; Strand: c
      • AT1G22330.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 795; Region: intergenic
      • AT1G22340.1 - [+] show detail - UDP-glucosyl transferase 85A7
        Distance: 135; Region: intergenic
    Flanking Genome Sequence: 15-5310-1 - 5-prime edge 
    GTGAAAAACT AACAAAATCG GTTATAATTA TAATAATTAT AATTGGTCTT 
    TATTTTCTGT TTGTAATCAG TGTAAATTGC TATAGAATAA CTTTAGCATA 
    ATAACTTTTA TTTTTGTTTG TTGATACCAA AATATTGTTA GAATCACACC 
    ACTAATATAA ACTTCAACAA AAAAAAAACT TCNTCTTTTC CTGNGCAAAA 
    NGTCCTTACG GGAANCAAAT TTTGTNTTCA AGTNTAAAAA AAAACNCATT 
    TCCTGNGCAA NAAAACAAGT CCTNTNTNCN TNTTTTCNCN CCTTGCCNAC 
    CAATNGGCAA ATGAAAGGTC NCTCTTGCTG GAGGCGGTNC NTAGGTAAAA 
    GGNCCTTTNG GGTCAAAATC ANCGNGGCCC CCAATNTGTT NTGTNTACGG 
    CCCGGCCCAN TNTNTCCTAT GGGAGGGGGN AAGTNAAATA GTNGTNTTTN 
    AATCATNAAT CTTANGGAGT NTNGACAAAG TANCCGANCN TNTNCCCAAA 
    ANCGNGTTTT TATCATCAAT CTCATTAATT ATTACCTNTA AGTTTNAATA 
    GTNCTATATN GCNCNCTAAT TNTTAANCNG ATCTAAAGTA AANGTATNAN 
    CTAATTAACC GGTAAAAAGT NGTAATAATC ANCTAGTTAA TTCAANGTAT 
    ATNTTAAAAA AAACTTANCT TTGNAACTTT GGGTTGGNGG GTCCATNTNC 
    AGNNNCTTTG GTTNANTTAC AAAAAATGGG TTTTAATAAG GTAGNCANCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7993902 [Map]; Strand: w
      • AT1G22610.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: -389; Region: promoter
    Flanking Genome Sequence: 15-5310-1 - 3-prime edge 
    TGGGTGAGTG AGGAGTAGGG TCAAAAGAGA CGTACCATCG TTGTCTTTGG 
    AGGACGAACG TGGTGGTGGC CATTTGTCTG CTTTGTTTGT TTATATGCTA 
    ACATAATTAG AAAGTGGACT AATTTCGTCG TTTTAATTTG GTTTAATTAT 
    TAAACAACCA CAATGAATAC GACAATGAAA TATATATATA ATTGTTTTAT 
    TGCAATGTGA AATCGATCGT TACCATCATG TGATCTAAAA TATATAGGCA 
    ATCATGTCAA ATATCATGAA ATTACAAAGC T

AT1G22330.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G78260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22340.1

Model type
Protein coding
Short Description
UDP-glucosyl transferase 85A7
Computational Description
UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22610.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).
Link
InterPro Scan - TAIR