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Mutant Lines
15-5315-1

15-5315-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 162258 [Map]; Strand: c
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: -1357; Region: intergenic
- AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
  Distance: -1696; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTAC GTTAGTTAAA CAAGGTACGT CACGTAATCA 
CGTTTAAGTG TGATAGCTAC GTGAAAACCA TGTGGCCTTT ATATTTTTTG 
TATGTAAGCT CGCAATATCA TTTCCTGCGA AGTTGCCTTC CTCGTCCACT 
AATGACGAAT ATATGTACAT TCATTTGAAT TTTTTGTCGT CAATATTGGT 
CAATAACCTA AGTATATATA TATATTCCAT TTTTATTGTT ATTAATACGA 
TATTGCACAC AATTTGTGTA TTAGTAGTAT AAATATTATG TATTGACTGA 
TGAATCATAT GTACATCGTG GTTCAAATTA AACAGCTCGA ATACACATTA 
TCAAAACGTG CTTTATCCAT ATTTGTCAAA TTTGTGTCTT ATCCGGGGGA 
AATAAATAAT TCAATTTCCA AGTCTAGTTA ATTAAATTTC AAAACCTTGT 
TAATCTCCAT TGATGACCCA TCCGATAACC AAATAAAATG GATTGCGAAT 
GAACCAATCA TATACGTACA GATTACTTTC TATGATGAAT TAAGAAACCA 
ATTATATCAA TGTGTGACTA ACTAGTCAAA AATGATCAAA CGTGTCTCAA 
AAGTATATAT TTAATGCTAG GNAGNGTGAT TTAACAATTG AGAGAACAAA 
AACAAAAAAC ATACCCAAAT GATAGTTTCG GTTTATATCC ATTCGGGTTA 
TCAATT

3 prime edge [+] show sequence

Chromosome: 2; Position: 162317 [Map]; Strand: c
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: -1416; Region: intergenic
- AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
  Distance: -1637; Region: intergenic

CTTCATGGTC TTGCTTTTTT TTGTTCATAA TTATTATCTT CATGGTCTTA 
CCACGTTCTT TGAACGTTTC TTAACTCTTG ACTTCTAATC AGTAGACAAA 
TTATTACACA TTAGACACAT CATATATAGA CAATAGGCAC ATTATTATTG 
TATGTAGTGA TCAAAAGTTC ATGGTAAATC TTTTGAATTA GTCAATAACT 
GTAGCCTAAA CATTAAAAAC AAAGATTCAA AGCTACATAT TTCCGACTGA 
CTTTTAACAT TGTACGGATC GGACCGTCAA GTTGATTTAA ACTATGATTA 
GTGATGATTT ATGGAAACCC TCTCTAACGT ACATGTGGAG ATATTGTGTC 
AGCTGTTATG TCATTGTTTA TAGCTTTCCA AGTTGCAAAG GAGACCATCA 
TTTTGGACTT TTTTCTTTCT TTCTTGTAAC ATCTGTTAAG TATCACTAGC 
TAGACACTTG CTATTAGGTC CACAACCTCG TTAGTGGACG GACCAGACCA 
TAATTAAGAA ATTAGACACG AGTGACCGTA GTATAAAAGA TTAAAAGTGA 
GTTTAGAAAT GTACCTGACT AGTACAATTT CCAGATTTCA TCGNGACATA 
AAAGGNGCAT CTAAATTATA AAAGATGGAT AATAATTGTC TTAAGCATGC 
ACCGTTAATT TTCCGNGATC AACGTAAAAA GTANCAATCG AGTATAATAT

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR

AT2G01340.1

Model type: Protein coding
Curator Summary: Encodes a protein whose expression is responsive to nematode infection.
Computational Description: At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR