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15-5333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608278 [Map]; Strand: c
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -794; Region: promoter
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -794; Region: promoter
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-5333-1 - 5-prime edge 
    ANANTANTTT GANAACGGGN TAAAACTAAC AAANCGGTTC TACGATAACG 
    GTCGGTACGG GATTTTCCCA TCCTACTTTG AAGATCATAG AAGCCTTTGA 
    AGATCATCTC ACCAGGGACG AGATCTCTGC TTCCCACACT TCCAAGAAAA 
    ACAAGAAGAG AGCTAAGAAG ATAGAGATAT CNGGAAGAAC AACCTCAAAA 
    TAAGAGTATA TGGTTATTGG TTAGCTAGTT GAAAAACTGT GCTATTTTGC 
    ATCAGGTTTN GCATATTCTT TCTTCTTTTG GGTTGGTGGT AACAACCTCA 
    AAAGAAGAGT GTATGTTTGA ATATGTCTTA GTTTCGGAAG GTGGACCAAA 
    AGAGATGTGT CTTTGTTTGA TTAGGCACTT CGAAAAAGTC CAAAGAGAGT 
    CTCGTTTAGA TATTTTGGGG AAGGAAACAC TTTTCCTATC ATGTATTCAT 
    GTTACTCTAT TTCGGACTTG NATTGCTTTT TTTNCNNNGA NNANNNNGNN 
    NTTTTNGNGG GNNNNNNNNN GNNNAANANN NT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608253 [Map]; Strand: c
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -769; Region: promoter
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -769; Region: promoter
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-5333-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCGTATA 
    ACCGATTTTG ACGAAAGTGG TTGATGAGCT CACGGTTAGA CGAAGAATCC 
    CATTTAGACC AGTAACTTGT GTAGCAATCA AAACATTGAC AGTCAAGCAG 
    AGGAGCTTTA TGGCTTCTCT TCTTCTTGCA AGATACGACG TTAGTGGTGT 
    TGAGTGACCT GGTGATTAAG TAAGCAAGAA CTTCCAGATC TTCGGCGGAG 
    AGAACCGAGA CTAGAACTAG AATCGCACTC TGGAGAAGCT

AT1G24267.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 154 Blast hits to 152 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24267.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24270.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR