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15-5406-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11747559 [Map]; Strand: w
      • AT4G22200.1 - [+] show detail - potassium transport 2/3
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 15-5406-1 - 5-prime edge
    ATGTGGATGT TGCAACCGNG CTTTAAGAGT ACTAAAACAC AATCTTCATA 
    TCCTCTAGAA GCTGCTACAT GCTGAAACAT GAATATAAGA CGACGAATTA
    ACGGCTGTGA TGATGATTAT GAGTAAGGGT TTTAAATGGC TTATGGTGAA
    AGCAAAACGT TACCAATGGA GTTTTTCCTT TGGAATCTGT AATGTCAGGG
    CTTAACTTAG CCTTAAGTAG CTCATCAAGA AGAGCTGCAT TGCCTGTAGT
    CACCACAGCG ATGAGATTTG AGGCAATGTT AGGAGGAACA ACATCGGTGT
    TTTCGCCATT TTGTTGTGCC TTTAGATCAC CAATGTCTAA ATTACTCAGC
    TTTTTGTGAT GCTGCAAGAA GTTCTTGAGC ATTGTGGCAT TGTCTTGTTG
    TTTAATCTGC ATTGTCTCAA TAAGGAAAGA TGTTTTGAGT CGGANAAGCT
    ACCANCCCGG GCCGTNNACC ACNCGNGNCC NT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11747443 [Map]; Strand: w
      • AT4G22200.1 - [+] show detail - potassium transport 2/3
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 15-5406-1 - 3-prime edge
    ATCCACATAA GAGGTAAACA CATCATACTT AAGAACCGTT ATGTTTTATG 
    TTCTACTGAT ATGTTTTAAG AACAAGATTT TATCATAATC TTGCAGATGT
    GAATGGTAAT AGTGCTCTAT GGGAAGCAAT AATATCGAAG CATTACGAGA
    TATTCAGAAT CCTTTATCAT TTCGCAGCCA TATCGGATC

AT4G22200.1

Model type
Protein coding
Short Description
potassium transport 2/3
Curator Summary
Encodes AKT2, a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential. AKT2 belongs to the Shaker family K+ channels which include the following groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).
Computational Description
potassium transport 2/3 (KT2/3); FUNCTIONS IN: inward rectifier potassium channel activity, protein binding, cyclic nucleotide binding; INVOLVED IN: regulation of membrane potential, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR