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15-5479-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27190814 [Map]; Strand: c
      • AT1G72240.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 65; Region: intergenic
      • AT1G72250.2 - [+] show detail - Di-glucose binding protein with Kinesin motor domain
        Distance: -2031; Region: intergenic
    Flanking Genome Sequence: 15-5479-1 - 5-prime edge 
    GTTTTACTTG ATGTAACACG TACCAAGGGT GAATTTAAAT TTGATTGGAA 
    AACGGTTATT TTAACCACGT CAACTAATGG TTTTTGGGTA AATTATTTGA 
    GTTAGATGTG TCATAGCCTT GTAATGTATT GTATATCGGA TTTTAACTTC 
    TTTTATTTTG TCACAAACAA GANTAAAATA CAAATTTGTT GGTATAAAAT 
    CTTCTTGCAA TTATTTTGCT GATTCTCTGC ATTTTCCGAA TGAAAAGATA 
    TCGAAGAATA ATGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27190886 [Map]; Strand: c
      • AT1G72240.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 137; Region: intergenic
      • AT1G72250.2 - [+] show detail - Di-glucose binding protein with Kinesin motor domain
        Distance: -1959; Region: intergenic
    Flanking Genome Sequence: 15-5479-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTA 
    CTATATATAA TTTCATGATA AAATACTTGA TATGGTCCTT GGTCCAAAAT 
    TTGTGTGGAC ATACTTTCTT GGACATTAAA TTTATGTGGA CTAAATACCA 
    CTAAAATGCG TAAAACAACC ACCATCTTTA ATGCATTTAG AAATTCAGTA 
    TTACAAATTT TTATGCTAAG CTAGATAGAT ATGTGACTAA ATAAAGAATT

AT1G72240.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G72250.2

Model type
Protein coding
Short Description
Di-glucose binding protein with Kinesin motor domain
Computational Description
Di-glucose binding protein with Kinesin motor domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Malectin/receptor-like protein kinase (InterPro:IPR021720), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2).
Link
InterPro Scan - TAIR