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15-5480-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7045192 [Map]; Strand: c
      • AT4G11670.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: intron23 (CDS)
    Flanking Genome Sequence: 15-5480-1 - 5-prime edge 
    CATCCAATTA GGGNCAGANN AAGACAATAT TAAAAAATAC TAGAAACTAG 
    ATTTTCTACT TTGATTTTGA GGTTCGGCCA TTTTGCATAT GAGAACCGGG 
    TCTTGATCCG TGGATTAGGC AGTTCCAATC TGTGTACTTA ACCTACGGCG 
    TGTGTCCCCT TGTAGGAGNG GGGGNTTGCC GATGGGGAGG GACTTCCTCG 
    TTCACTANTT GAGCAAGAAG CGAAACAGGC GAAAGAGATC CTCGACTTGT 
    ACTCTCTCGA GGTAAATATA TTTTGCTCAC TTGCAAATTG CAAACTTAGT 
    TCCTTTCTTA GAAATTATGA GATACCAAAG TGTTACGGAT TATGTCCGTT 
    GTGGCANAGC GATATGCTAA TTCANATGCT AATGACTGCN AGCGANCTCA 
    TCAACATGGG GGTGAGTTCA NANCANCGGC GCTNGGAGGA TGCACAAACT 
    CTTGTTAGAG TTCTTTGCCC CANNAAANAT CNNAACGCCT CCAAATTCTT 
    AAAGCGCCAN NCNAACCTNC TNTGNNNNCN GGTANANCCC CCCCNCNCCC 
    NACCCNTNAA AACCTGGNCC NTNNTTNANN NANAANAAAA ANNNNNTTNN 
    NA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7045264 [Map]; Strand: c
      • AT4G11670.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: intron23 (CDS)
    Flanking Genome Sequence: 15-5480-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TGCAGGGAGT ATACAAGATG ATAGAGCTCG AAAACTTTGG TTTCCAGTAG 
    AATAAGTACG GAATTTCAAA ATAAGAATAT AAGTTGCTTA CTTTCAAAAT 
    ACTGAGATCT TCTTCCATCA AGGTGATGTC AGAATCCGAA AAGGCACNGG 
    GTTGGCCCTC CATCAAGTAG TACTCGAACA TAGGCTTCCT ATGGGAGAGA 
    AGCATGCCAT TTTTGTGGGC ATAAAAGAGG TTAGAGTTAG TTAACTTGTT 
    TCCATATGCA AAAGAGAAAA GAAGTGTTAC CAGAGCGGAT CGGCAGATGC 
    TTAACACCAC CATATCCCGT GAGTCCTCAT AACTCAAACT GCATACAGTA 
    TCAAGGACCT GTGCATTGCA TTTCCTAGTG TAAGTTCATG CTTAGTAGAA 
    CGGGGTGAAT AAAAGAAAGA GATGATTTTG GTTTACTGAA TCAATGTGAG 
    GGAGTATTCT TTCCAAGCGG GCGCCTTCGA CTGTGCCATT GTACAACTGT 
    ATAAGGAACA TGTCTCTCAG ATCCCAGAAA ATCGCTCTTG CCCCTGACAA 
    AAAGCAACAA TAAATGCAGA AACCAGAGCT AAACCGACTT CTTTGTCGTT 
    GATAACACAA AAGTCTTAAA GAGTAACACA ATCCATCCAA CATTCTCACT 
    CATCCATGAG GATCAACCAA TAAAAGAGGA ATGCGTACTT TTGCCAAAAG 
    AACTGAAACA TGATTAATAT

AT4G11670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT5G06970.1); Has 193 Blast hits to 179 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR