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15-5500-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11539733 [Map]; Strand: w
      • AT1G32080.1 - [+] show detail - membrane protein, putative
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-5500-1 - 3-prime edge 
    ATCACATCCA CGTCGTCGTC TCCATACCCA TGGCAACTCT TTTAGCCACT 
    CCTATCTTCA CTCCTTTAGC TTCTTCTCCA GCAAGGAACC GTCTTTCTTG 
    CTCTAAGATC CGTTTCGGTT CCAAAAATGG GAAAATTCTC AATTCTGATG 
    GTGCCCAGAA GTTGAATCTC TCAAACTTCC GTAAACCCAA TGGACAAAGA 
    TTTCTCCAAA TGGGTTCTTC TAAAGAGATG AACTTTGAGA GAAAACTCTC 
    AGTACAAGCT ATGGATGGTG CAGGAACAGG AAACACATCA ACGATCTCTC 
    GTAACGTAAG CT

AT1G32080.1

Model type
Protein coding
Short Description
membrane protein, putative
Computational Description
membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link
InterPro Scan - TAIR