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16-0003-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7935364 [Map]; Strand: c
      • AT3G22410.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0003-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT TTGTATTGTT AAGAAATCAA ACACTTTTTC 
    TTAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7935381 [Map]; Strand: c
      • AT3G22410.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0003-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTACACAA 
    AAAACATACC AATATCGAAA TTTTGTCTCC AAGAAAGACA TGAAATGAGT 
    TGTTTCGCAG ATTTTTTCAC ATTATCTCCT TTCACCTTCA AGAATCTCTC 
    AACACACTCT CTGTTACAGA ACTTCTCCTG TAACAAAAGG TTTTGTTATT 
    TATGAAAAGT TCGAAGCT

AT3G22410.1

Model type
Protein coding
Short Description
Sec14p-like phosphatidylinositol transfer family protein
Computational Description
Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G05370.1); Has 1605 Blast hits to 1605 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 291; Fungi - 365; Plants - 752; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink).
Link
InterPro Scan - TAIR