1. Home
  2. Mutant Lines
  3. 16-0017-1

16-0017-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 13156002 [Map]; Strand: w
      • AT1G35620.1 - [+] show detail - PDI-like 5-2
        Distance: -366; Region: promoter
    Flanking Genome Sequence: 16-0017-1 - 3-prime edge 
    ATTTAAAACG GNAGAGGTAT TTTACNGACC GTTACCGACC GTTTTCATCC 
    CGGTGTGTTC GCTATCAAAC TGTCGGAACC GTCCAAAAAA CAAACTGCAA 
    CTGCGCGGAT CAATCAAAGA AATAAACATA AAACTGAAAG AAGATCAACG 
    TTGGTGTTAT AGGAGCCACT TAATGTTAAT CCCCGACCAA AAAACTACAT 
    AGACTTTGAG AGCTTGCTTG AAAAGAGACA ACGGGAAAGA CAAGGAAAAG 
    TGAAAGGACA TTTTATTTGA AAATATATAT AGTTATTTCT TTAAAAATAA 
    TTCAGCAATG AAAATCAAAC AATAGAATTT CAAGAGTTAA AAATAATAAT 
    AAATTTTACA TTAAAAATTG TAAACAACAA ATAAAATAAA ACAACATATT 
    TTTGATTGAA CTACACTTAT TAGTAAAGAG ATGGAATAAT AAAGAATAAA 
    AAATAAATTG TGTTTTTCTA GGAATGTCAA TTAGACAATT AGGATCAAAG 
    TACAAATCTA AATTTTAGTT CGATTCANAA TCCGAGATAT CTCAACTTCA 
    AAAGATCTTT TANATTAAGA TTGTTCCGGT TTGGCCATTA TTCGGGTTTA 
    GCTAAATGGA GTTGGGAAGA GTGCCTCCCT AAATANATNG ATGNGCTTGT 
    CAATCCAATT CTATAAGTTC TATNTGGACA TTNNAGANTG NGNANANGNA 
    NNNGNNANGG CNCCCNNCGC NTNATNTGNG NCNTTTTANT GNCNNNNNNC 
    TCTCNGAGNG AAANGTNTNC NNNGNNNAAG NTTATNNNGN GNGANGGG

AT1G35620.1

Model type
Protein coding
Short Description
PDI-like 5-2
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.
Computational Description
PDI-like 5-2 (PDIL5-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.2); Has 16921 Blast hits to 14897 proteins in 2775 species: Archae - 169; Bacteria - 7975; Metazoa - 3273; Fungi - 1120; Plants - 1363; Viruses - 4; Other Eukaryotes - 3017 (source: NCBI BLink).
Link
InterPro Scan - TAIR