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Mutant Lines
16-0055-1

16-0055-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 6447587 [Map]; Strand: c
- AT1G18700.3 - [+] show detail - DNAJ heat shock N-terminal domain-containing protein
  Distance: 4541; Region: intergenic
- AT1G18710.1 - [+] show detail - myb domain protein 47
  Distance: -3007; Region: intergenic

GATAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATGTTG 
TTGCGAGTCT TTCTTGGGAT GTCTTATGGC TGTCCCATGT GGAGCAACAT 
GATAGGCCTG AAATATAGAG ATTTTAATTC CAAAAGCCAT TTTTTACTCT 
AATAGATCTA TCTTTTTTTT TGTTAAACTA CCTTTAATAN ATCTGCCAAT 
GNTTTTTTCC AAATTAATTC NNCCCAAAAA TCCCGGACAG TCAAACANAN 
ATGGACAACC AATTTGCCAA NACATGTAAA GAATATTGAA AGTNCAAAAA 
TAACTGTCGT CTGTGAAAAT GGGNGANANA TCGANATATC CATNCTTGAA 
AAGGATATGT TTCAACTTTG TTNAGTTTNA TTTTCTTTAT ACATTTNAGN 
ANGTCATGTN GGGTATNATA TGTATATNCT AATTCTATAT CGGNTNAAGN 
TACNAACCCG GGCCGNGNAN CANCCCCNCC CCNC

AT1G18700.3

Model type: Protein coding
Short Description: DNAJ heat shock N-terminal domain-containing protein
Computational Description: DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Thioredoxin-like fold (InterPro:IPR012336); Has 369 Blast hits to 369 proteins in 91 species: Archae - 2; Bacteria - 18; Metazoa - 191; Fungi - 18; Plants - 98; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18710.1

Model type: Protein coding
Short Description: myb domain protein 47
Curator Summary: Member of the R2R3 factor gene family.
Computational Description: myb domain protein 47 (MYB47); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to jasmonic acid stimulus, response to salt stress, regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: leaf lamina base, stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 95 (TAIR:AT1G74430.1); Has 8675 Blast hits to 7987 proteins in 483 species: Archae - 0; Bacteria - 0; Metazoa - 776; Fungi - 509; Plants - 5635; Viruses - 3; Other Eukaryotes - 1752 (source: NCBI BLink).
Link: InterPro Scan - TAIR