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16-0058-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8333205 [Map]; Strand: w
      • AT1G23480.1 - [+] show detail - cellulose synthase-like A3
        Distance: 0; Region: intron1 (5UTR)
      • AT1G23480.3 - [+] show detail - cellulose synthase-like A3
        Distance: -491; Region: promoter
      • AT1G23480.2 - [+] show detail - cellulose synthase-like A3
        Distance: -501; Region: promoter
    Flanking Genome Sequence: 16-0058-1 - 3-prime edge 
    ATTATCATAC GAACAATGTG CTTAAATCTC AAAAAGAGTA ATTCTAAAAG 
    TCATAAACCT TTTAGAGATT TATCAGAACT TGAAAGCAAA TGCAATATGA 
    GTCAATAAGC TATTGGAAAA AGTGGAGAGT TTGTGAGTTT ACCTAAGAAG 
    CT

AT1G23480.1

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4758 Blast hits to 4752 proteins in 1373 species: Archae - 199; Bacteria - 3673; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23480.2

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4744 Blast hits to 4738 proteins in 1369 species: Archae - 198; Bacteria - 3660; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23480.3

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR