1. Home
  2. Mutant Lines
  3. 16-0116-1

16-0116-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 110796 [Map]; Strand: c
      • AT4G00240.1 - [+] show detail - phospholipase D beta 2
        Distance: -78; Region: promoter
    Flanking Genome Sequence: 16-0116-1 - 5-prime edge 
    TATATATATC TCTCTTCTGA TCAATTCTCA AACCGCATTG TTGCTTTTTT 
    GAAATTTCGC TTCTGATGAA GAAATGTTGA TCGGAGAAAA CGTTGAAGAC 
    GTTTGAATTT CTTTATGAAT TAGCCAGTTG TGGTGTTAGT TAGTTACGAT 
    GGAGAATTAT GGTTGGAATT ACCCTTATTA CCCTTACAGG CCTCCCCGGC 
    CTAATCCTCC TTACCCAGCA CCGCCTCATC ACCATGGATC AATGTCTCAT 
    TCGGGTCCAT TAGACCACGA CCACCCTCCA ATGAGTTACT ATGCTTCTTT 
    TGATTACCAA CACCAACCTC CTCCTCCTTA CCCTCCAGTG AGTTACTATG 
    CTTCGTTTTC AAGTCATTCA GATTTATCAT ACTCAGGCAG GCTAGATTCG 
    TCTGGTCATG GTTTTACATA TACCGCATCG CCGCATAGTC CCGGTATGCA 
    CATTGTGCCC TTTGGTAAAG CCTCCTTGAA GGTCCTCTTG TTGCATGGTA 
    ATTTGGATAT TTGGGTTTCT TGTGCTAATA ATCTACCAAA CTTAGATTTG 
    TTTCATAAGA CATTGGGTGT TGTGTTTGGT GGCATGACCA ATATGATCGA 
    AGGCCAGTTG AGCAAGAAGA TCACTAGTGA TCCTTACGTG TCCATATCAG 
    TCGCTGGTGC TGNCATAGGA AGAACATATG TCATTAGCAA CAGCGA

AT4G00240.1

Model type
Protein coding
Short Description
phospholipase D beta 2
Curator Summary
member of C2-PLD subfamily
Computational Description
phospholipase D beta 2 (PLDBETA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D, plant (InterPro:IPR011402), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D/Transphosphatidylase (InterPro:IPR001736); BEST Arabidopsis thaliana protein match is: phospholipase D beta 1 (TAIR:AT2G42010.1); Has 2407 Blast hits to 1935 proteins in 427 species: Archae - 0; Bacteria - 522; Metazoa - 526; Fungi - 534; Plants - 642; Viruses - 3; Other Eukaryotes - 180 (source: NCBI BLink).
Link
InterPro Scan - TAIR