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16-0149-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)
    (Flowering & Growth::growth defective)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8666409 [Map]; Strand: c
      • AT1G24460.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT1G24460.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-0149-1 - 3-prime edge 
    GATGACGATG ATAATGATGA CCTTGGAACT CATTTCAATG TCTGTTATTT 
    TTTTTATGAT TCTTTCTAAA GTCTAAATTT TTAGTTGAGT TTCCTCGAAA 
    ATTTATTGAA AGATCTTTTC TTTTGTTTGT TTTCTGCATA TAGATTGAGA 
    AGGGGGATTG GGAGAATGAA CTTGCAGGGC TTCAGGAGCA GTTTAAGCTG 
    TTGACTGGTG AGAATGATTT GACAGGTGAA GATGGGAACA CTACTGTGGA 
    TATTGTCAGT CGCTTCTCGA AGTTCTTAAA AACTGCCAAG GAAGAGCGGA 
    TTCAGCATGA GGTTGCACTC AAGGAGCTTC ACGGGGTTAT TAGTGGGAGG 
    GACGATGAGA TTGCTGATCT CACCACAAAA ATCTCTGAGC TTTCTTCGTC 
    GCAGCCGGTT TCCGAAATGG GTGATCAGGC ACAGAACTTG GAGCACCTTG 
    AGGCTGCAAC GGATAGGATT ATGGTTTCTC TTANTAATGT ATTTGGGGAA 
    GGGGAGTTGC AGTATGGTTC TTCTATCTCT GAAAAGCTAC CANCCCNGGC 
    CGNNNACCAC CCCTGCCCTN TA

AT1G24460.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24460.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1).
Link
InterPro Scan - TAIR