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Mutant Lines
16-0186-1

16-0186-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 6942116 [Map]; Strand: w
- AT1G20020.1 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
  Distance: -601; Region: promoter
- AT1G20020.2 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
  Distance: -601; Region: promoter
- AT1G20020.3 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
  Distance: -601; Region: promoter

GCTGGGAGGT TCANCNTGAA AACATAGATA TAGCATTCGG GACAGACTAA 
AAGGGACCGT NTCGCGTATA GTNCAGGTGA TGCAACCGGA TAGACNAAAC 
ATCTTGGAAA CAAGAGAGAG CNGTTGGATA GTACCAACTC TCTTGGAAGT 
GACATCATCT CCATATGTAA ACTAGATTCC CTAAAACAAA ACAATCCACA 
ACTTCAATTT TGTATATACA TTCATCATTT TGCAAATGTG GATATATAGG 
CATTGATTGA AAAGTGAAAT GGTAAAATAT GATATAATTT TGATCAGGTA 
GGAAAGTTAT GGGTGATAAT ATCTTGTCCA AAAATAAAAC ATTGTAAAGT 
ATATTTAAAG GAAAGGGCCC TTGTATAAAG CT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 6942052 [Map]; Strand: w
  - AT1G20020.1 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -665; Region: promoter
  - AT1G20020.2 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -665; Region: promoter
  - AT1G20020.3 - [+] show detail - ferredoxin-NADP(+)-oxidoreductase 2
    Distance: -665; Region: promoter
Flanking Genome Sequence: 16-0186-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
TGCTCCCAGC TAAACTCAGC TGGTATGTTC TCGACCGGAA AACATCAGGT 
CCTAGTACAG CTAAGAGCTA ACAATCTCTT GGTGGCTGTT CCCTTGCTCC 
ACTTACATAG TTATATGTCT CTACGTTCAA GCT
```

AT1G20020.1

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: ferredoxin-NADP(+)-oxidoreductase 2 (FNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6774 Blast hits to 6774 proteins in 1708 species: Archae - 20; Bacteria - 3604; Metazoa - 802; Fungi - 759; Plants - 616; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20020.2

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6542 Blast hits to 6542 proteins in 1635 species: Archae - 18; Bacteria - 3429; Metazoa - 796; Fungi - 693; Plants - 607; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G20020.3

Model type: Protein coding
Short Description: ferredoxin-NADP(+)-oxidoreductase 2
Curator Summary: Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma
Computational Description: LEAF FNR 2 (ATLFNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6779 Blast hits to 6779 proteins in 1702 species: Archae - 20; Bacteria - 3601; Metazoa - 804; Fungi - 729; Plants - 614; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink).
Link: InterPro Scan - TAIR