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16-0188-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19240229 [Map]; Strand: w
      • AT2G46810.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 16-0188-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCTTAAAGC CAAGGCATCG ACAATTACAT GTTTAGCAGA TAAGAAGCCT 
    CAATTCACGG GTTAACCGAA ATAAGAGACT TCAAAAGATT CAATTTTTAT 
    CTATTGGGTN GTAACAAAAA TCAAGCT

AT2G46810.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G61950.1); Has 1496 Blast hits to 1481 proteins in 142 species: Archae - 0; Bacteria - 20; Metazoa - 45; Fungi - 33; Plants - 1336; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR