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Mutant Lines
16-0192-1

16-0192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8630947 [Map]; Strand: c
- AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -493; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
ACAGAGCACA ACATTTCTCA AATCTATCCT CAGATGACCG GATTAAGCCC 
ATCTGGTGAT ATCAAACCAC TTTTGGATGA TGAATCCCAG AGACCTCGTG 
TTATCACTCC TTTTCCTTCT CCTAAACTCA CCGACTTGTC CATGGTAACT 
CTCTTTTTGC TTTTCTTCTT GTTTTCTCAG TGGAAAGTTT GACTTTTTGG 
AACTTTTTTT TTTTTNGCNN NATTTNNNGG GGGGCCCCNG GGAANGTTTN 
NACCCGGGGN GGGNNANNNC CCGGNCCTTT ANNNNANNNN NNNNNGGGGG 
GGGGGGTTNN AAAAACCCCN GGGGGGGGGA AAAANNGNGN NTTTTTTAAA 
A

3 prime edge [+] show sequence

Chromosome: 1; Position: 8630972 [Map]; Strand: c
- AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
  Distance: -1; Region: promoter
- AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -468; Region: promoter

GGCTTAATCC GGTCATCTGA GGATAGATTT GAGAAATGTT GTGCTCTGTA 
AAATGATCGT TGAAGCTGAG AAATAACAAG CTAAAGCTAT AGTAGGTGGA 
CTTTTGAGCT ATTTGACCAA ATGTAGATCG TGATAGCAAC NTGATTGTCC 
TTTTTAAATA CNTTATTGTT GTTGCCAAGT CTTTTTATAA TACAGAAATT 
AGCTATAACC ATTTTATAGT ATTTGTCTAC TACACAATTT TCGACATCTC 
TCTCGTATCT TATCATGAAG CCTTTCTCTT TGTGGCTGGT CCCGGTACGT 
TCTTTCACCA AAATTATTTT CGGTAATCCA TTTTTTTTGG TATTGTTGTT 
GCCACTTTTC CACACGTGCG TTAATTTTCT TATTCCAGCT CTTTTTGTTT 
TTGTTTTTTC TTGTCGTATC GAGAACTCGT GTCTGGTTCG TGTTTCAATT 
ACTAATCGTA NATTTTTGCG AGTTTTGTGG AGCTGACACA GTTCTTCTCT 
TTCTCATCAT CATCCCCATT TTATTCGTCT CTCTTCCTTC CGTTATGCTC 
CATTTCTTCC GTTTTTCGNA TTTNCTCTTC TCTTTTTATT TTTATTTTTC 
TGGGATAATA ATAAAAACTC TTTCTTGGAA CAAGGTAATC GATTTCTCTT 
TGGTTTTTGT TTCCAATGAT CAAATTTGGT TTTCTTGTTT TCCCACNACA 
ATGATTCNTN ATTTGNAAAT GANAAAGGAA

AT1G24320.1

Model type: Protein coding
Short Description: Six-hairpin glycosidases superfamily protein
Computational Description: Six-hairpin glycosidases superfamily protein; FUNCTIONS IN: mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity; INVOLVED IN: oligosaccharide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: glucosidase 1 (TAIR:AT1G67490.1); Has 471 Blast hits to 459 proteins in 200 species: Archae - 2; Bacteria - 99; Metazoa - 113; Fungi - 132; Plants - 45; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24330.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink).
Link: InterPro Scan - TAIR