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16-0251-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9188328 [Map]; Strand: c
      • AT4G16230.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
        Distance: 1549; Region: intergenic
      • AT4G16235.1 - [+] show detail - pre-tRNA
        Distance: -3248; Region: intergenic
    Flanking Genome Sequence: 16-0251-1 - 5-prime edge 
    GGGATAAACT AACAAAAGTT TTGAAGGTGG ACCACATGGA ATCAGCCCAC 
    CTACTTTCCC AACTAACGAA CAACAAGGAA TCTTCTCACT CTCAAAACCT 
    ACAATATCAA ATCACAAAAT TCATACGTTT AAATCTGAAA GAAGTATCAT 
    AACATTATTA AGAAGTCAAA TGGTTGAGTT TACGTACCGT AAGATGAATA 
    ATTTTGTATA ATATCATAAA CAATGCGAAA AACGTCACCG TAGACGAATC 
    TTGAACCTTG TAGATGATTG TTTAACTCCT CGACGAGTAT TTTCAGCTTG 
    AGATTATACA TTTGAGCCAC TTCATTAGGT TCGACAGAAC ATTCATATCC 
    AGCTATTGGA TCAGACTCTC TCTCGAACGG TATACAACCG ATGGGACCAA 
    TATTGATCAC CACGATTTTC CTCGCACCCA ATTGGTACAA TCTCTACCAA 
    AAAACATATA AATTAGTTGG GTCAAACCGG TTTAGTTTAA ATTCGGTTTA 
    CATGATTTTC ATTTAGTTGA AATTAGAGAA GAGATTTATT ACGGTGAGTT 
    GTATTCGGAA TCTTGAGATC ATTGTATCAA CAAAGACTTG TGGAGATGTG 
    ACTCTCCGTT GAACGGGGGT GAGATAATTG GTGATTAGAT CATTAGAACC 
    GGTCGTGACC GAGAAAATTG CTGACCGAAA TAGTTTANCG GCTTCNAATT

AT4G16230.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G50400.1); Has 3023 Blast hits to 3001 proteins in 82 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 4; Plants - 2958; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G16235.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Val (anticodon: TAC)
Link
InterPro Scan - TAIR