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Mutant Lines
16-0259-1

16-0259-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 864886 [Map]; Strand: c
  - AT2G02960.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -480; Region: promoter
  - AT2G02960.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -490; Region: promoter
  - AT2G02960.3 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -522; Region: promoter
  - AT2G02960.4 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -439; Region: promoter
  - AT2G02960.5 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -527; Region: promoter
Flanking Genome Sequence: 16-0259-1 - 3-prime edge
```
GATTATGGAA ATAGCTTAAA ATTCTAGTAC CATTATATCA TTAGGGGATT 
TCTCTTTTGA TAAGAACGTA TTCTCAATAA GTTAAAATAC TACTAGGAGA 
CAACATTTGT TTAGTCAAAC AAATAAAGAT TAGATGAGAC AAGTAAACAT 
TATCTAAAGT ATTTCGAAAC TGCAAAACAG CAAAGACCTC TCAACTACAT 
CAACATCTAA GAAAACGATT GAAGACTTGA ATGATTCCCA AAGTAGACGG 
ATAATTTTAT ATAAGATTCA AAAAAAACTA TATTATCGAA GTTAATTATA 
TATTTTGATC ATACAAGTGT TAATAATCTA AACAGGACTT CATTGAAATC 
ATAAACCCTC CCCACACAAT ATACGAATTA CTCACCTACC CCATGACTCT 
CAAGCAAATA GAAATTTCTA AACCAAACCG TTGATACATA ATTTCACTCA 
GATGCTGGCT TACTTTACCT CTACTCCATT AGAGAAGATA TAGAAACTTT 
CAGAATCATA AGCAATTANA GAGGCAGGAA GCT
```
5 prime edge [+] show sequence
1. Chromosome: 2; Position: 864770 [Map]; Strand: c
  - AT2G02960.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -364; Region: promoter
  - AT2G02960.2 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -374; Region: promoter
  - AT2G02960.3 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -406; Region: promoter
  - AT2G02960.4 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -323; Region: promoter
  - AT2G02960.5 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
    Distance: -411; Region: promoter
Flanking Genome Sequence: 16-0259-1 - 5-prime edge
```
CCATAATCAT AATGTCCTAA TGATATTATG GTACTAAATT TTTTTATCTT 
ACACAACAAT TATTCTCACA TATCTGTTTA ATATCATACC ATAAGCT
```

AT2G02960.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.2

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 759; Fungi - 135; Plants - 605; Viruses - 31; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.3

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.4

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02960.5

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR