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16-0266-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14057692 [Map]; Strand: w
      • AT4G28430.1 - [+] show detail - Reticulon family protein
        Distance: -100; Region: promoter
    Flanking Genome Sequence: 16-0266-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TGGACAGGTA GCCGGAGAAA AAGCAGAGAG CTCAAATTGT 
    CGGAATTAAG AATCCCCAAA TCACATCTTC AAGAACCCTA ATAAATTCCC 
    AGAGATTCCT CTCATTTAAT CACTTCAGAT TCGAAAAAAG TTCTCTCTTT 
    TTCCCAAAAA AAACTTTCTC ATACAATGGA CTCTACTACC ACACCTCCTT 
    CTCTCCGTTC GAATACTAGA TCCGCTTTGC GTCTAGCTCG AAACAACAAA 
    ACTCTCGTAA AATCTCACAT TCCATCTCTC GATTTGGTTT TATCGTCTCC 
    GAAGAACAAC AACGGTACTC CTTACCCATC ACCTGTTTCT CTCAGTTCAC 
    CATCTTCTCC TGTTACTCTT CGTGAGATTC TCCTTTTATC TCCTTCCCCT 
    CTTCGTAAAT CGAGAACCCG TTTAAGCAAT CGGTTCGATA TGGAAGCTGC 
    GGAGGCTGCT GTGACGGCAC GACGGAGTAA GACGAAGGGA GGGCAAAATG 
    GTCTTTTGGC CTCGCCGTCG CCGAGGAATT TCCGGAGGTC GAGACTTAGG 
    TCGGAGGCGA TGGTAGATAC AAAGGAAAAT ACGGAGCCAA TTGTTGTCGT 
    GACCGATGAA AAGAAACAAA AACAGAGGAA ACAGAAGAAG TTGGGTCGAT 
    CTAACAAGGA GAAGCACAGT TCTGTTCCTC TGGTAGCTTC TCCTAGTCCA 
    TCTTCAGATC AACGTATGTC CTTCCTCTGT CTATTAGCTC ATTCGATTTC 
    CCTTTCGNGC TCTAATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14057637 [Map]; Strand: w
      • AT4G28430.1 - [+] show detail - Reticulon family protein
        Distance: -155; Region: promoter
    Flanking Genome Sequence: 16-0266-1 - 3-prime edge 
    ACTGTGGATC AGAGAGCCGT TGATGAAGAA AGAAAGTAAA AGACAAATCT 
    TTTGCATTTT TTAAATTTGA CGGCGGCAAA GTGGGTCCGT CTCTTTTAAC 
    GGTAAAGATA AAGTCTTGAT TCAACATTAT TCATGTCTTT TTCTACTTTG 
    ACTCAAACAA AGAAATAAGA TTAAGAAACA TAGAGTTTCT TATATGAAAA 
    TGACATGATT ATTGTTTTTT ACACCACAAA AATTGCAGAT TTTTTATTTG 
    GTTGTGTATA GTCTCTCTAT AGATGAGTGG TTTAGATTTT GCCATTGCTC 
    AGAGCTTGAA AAGAAGATTC TGTTTTCTTG AGATGGCGTT TGCAGAAGCC 
    ATTGAGCCTC TCAAGTGCAT CTTCCAGCAT CTGAGCTTCT ACTCCAATTG 
    TTATCCTTAT CCAGTTCTTC AATCCCAAAG CCACTCCTGG TAGTAAGACN 
    AGGTTTTCTT CTTTGGCTAG CTTCATACAG AAATCCATGT CGTCTTCTAT 
    GTCCTCCAAC AATGGAAGCT ACCANCCCGG GCCGNNNACC CNCNTGCCCC 
    C

AT4G28430.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR