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16-0275-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559903 [Map]; Strand: w
      • AT2G47740.1 - [+] show detail - pre-tRNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 16-0275-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCN GTACNGGANC ATGCTGCTTG NTATTNGGCN
    GACCAGNCAT TGATGCTNAA CTGCTANCAT TCGCNCTGAN GGNAANGNNC
    NGTGNTGANA GATANAANCA NANNNANTTN NNGGATAAGA TAATGGCGGC
    TGAGGAGGAT GANNANATAA CNAAGGGCCG GNCAAAGCAC TNCNCGCGCC
    NTTAGAAAAC GGTGAAGGAA GAAGAAGAAA CAGAGTAGAG GAAGTGGTAA
    CGCCGTAGCG GTGAAGCAAC GACGTCCGTC TTAAGTCGAT AAAATTTCTT
    ATAAATATGT TTTATCAATA AAGCAGCGAA AAAAAAAAAA AAAAAAAAAA
    NNGNTTTTTT NNNCNGGGGG NGGGAANNNC CCNNNNCCNT TTA
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19559925 [Map]; Strand: w
      • AT2G47740.1 - [+] show detail - pre-tRNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 16-0275-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    NNCATACNAC CCTNGCACCG GCGCTGACCC GGGTNNNNTA TCCTGNATGC
    CCANCTACTG GATTTNAAAA NGATANCACT ATNAANACAC TNANANGCTA
    CTNAGCNTGG NAATCCATGG NNNAGATCGA NTNNCNCNCT GGATACAACC
    ANTNGNATAN GATGGNACNG NNTCNTNATA CTAATNGNTA GAGATCTNCC
    ATNCTNNCAA CCCATNNNAT GCTCTGGTTG GCTTANGGGN ATNGCNNGNT
    NTATAGGTNN NGAGAGCGNT ACGCGGNTGC GACATCATAG CATGTNANCT
    NNNNNCNAGA CCGGATTGAG ATCANTANCT NNGCTGTTNA NCAACNCCAT
    AGGCGTTATA GGCTATTCTN GGNTTNACNN NANTGGNATG NTATNCAGNG
    CTTTGTCCAT AGCTGGATCC ATGACGATCC NGGCTCTTCA TANGGTACAT
    TGTATNAGGA GATGGAGATC TGGNGATGGA GNNNGATNNT TTGATCCGCT
    CACACTGACC TGGAANCCAG GGTNATNGNA TATGNGNAGG NGGNGGATGA
    CATNNNTNAT NCTGGAANAC ACGAGCTCAT AGTCNNATGA TNAGANANTC
    ACGGGACGAC GTTAAGTCGG NCGAAAGGNN AANACGGGAC GTGAACAACG
    NAGGACGGTC ACTACTGCTT CTGGAGGTCA TAACCTTAGC CCAAGCAGGC
    CTGGCAGAGA TCTTCTAATC CACTCGCTAA CCTTAGGGCG AGAGTCAAGA
    GCNCCTTGGA GTCAGNCCCA ACNANGTATG GGTG

AT2G47740.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: CCC)
Link
InterPro Scan - TAIR