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16-0299-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18429727 [Map]; Strand: c
      • AT4G39710.2 - [+] show detail - FK506-binding protein 16-2
        Distance: -1315; Region: intergenic
      • AT4G39720.1 - [+] show detail - VQ motif-containing protein
        Distance: 165; Region: intergenic
    Flanking Genome Sequence: 16-0299-1 - 5-prime edge 
    TTGTTAATCT TAGTTTTTTC CATAACTATA TGTTGGTAAG TATTAGTTAG 
    TAGATGGATC TCACCATTTG AATCAGATTT TCTTTGTATA TTTTCTTATA 
    ATTATATAGA ACTTTTAAAT TTTAATGACA ACGATGACNT TGCGATATGA 
    AATTTTAATT TTTCAACAAT CAATATACAG TACGTGGTTT CGGGATCACT 
    ACGGTTAATA TTTCTCCTAA TTAATATTGG AGTGAATGGT GGCGAAATTT 
    GGGGAATCTT CCACGGCCGC CGGATTGTGG AATATGGTTT TGGGACCATA 
    GTATATAATT ATTAATTAAT TATAGACTTG TGGTGATTTG AAATTTGATA 
    AATTACTGTT CTCCCATGTG CTTATTCATT TTTGGTGTAT CATCTACATT 
    AACGTCAATT TTTATTGACT TGACTCTCAT TTTACCATAC CAACAGATTT 
    GAAATTTGAA AATTTCCCAA GCAAAAGAAA AACAGGTAAT CAATAATGAT 
    AATTATACAT ACATTTTGGT TTTGACCTAC TTTTGTCATA TGACAATTTA 
    TCTTTATAGA CACTTTTACT TCTATTATTA TAAGTCTCTT TGTTTGTGAA 
    TAGGGGCAAA TTTCATTTGA CCGCCTCCGG CAACCATTGA CCTTGTCACG 
    GCTCTGAATG TGATGCGTCT ACAAAATT

AT4G39710.2

Model type
Protein coding
Short Description
FK506-binding protein 16-2
Computational Description
FK506-binding protein 16-2 (FKBP16-2); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1).
Link
InterPro Scan - TAIR

AT4G39720.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G35830.1); Has 406 Blast hits to 390 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 7; Plants - 145; Viruses - 0; Other Eukaryotes - 244 (source: NCBI BLink).
Link
InterPro Scan - TAIR