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16-0320-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8604762 [Map]; Strand: w
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: intron12 (CDS)
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: intron12 (CDS)
    Flanking Genome Sequence: 16-0320-1 - 5-prime edge 
    CTTCAAACCA GACATAGATT GAGTGTGCTG AAGTGGACCA CGTGACTGCC 
    CAAATGTAAT GTCAGTATTC ACTCAAACCA AGTTCAGTTT CTAATCCAAA 
    ACTCTAGTTT GAGATAGAAC AAACCTGTTG AGCTCCATTA GAAGTTGAAG 
    GCGACTGAGA TTCACGGGGA GAAGCAGGAG GCAAAGACAA AGTCTGCTAA 
    CATTAAAACA CCACAGAGGA ATAAGCAATA GAACGGAACA AGAGGTAACA 
    ATCCCAATAA CGTGATAAAC AGTTGAAAAT CATTGTGAGA CCAGTTTAGT 
    CATTTACCCT TGACGATGGT GTCATAGGAG CTGCCTCAAG GGCTGGCACT 
    GCTGAAGTTG ATGGTAAAGC CTATACACAA TAGAAGTTGG GGTAAATAAG 
    ATAAAATTGT AGATTATGTA GCCAATTTCC TAAAATGCAC TGCACAATGG 
    AGAAGCATCA TGCCTTATTG GACTCTTGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8604646 [Map]; Strand: w
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: intron13 (CDS)
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: intron13 (CDS)
    Flanking Genome Sequence: 16-0320-1 - 3-prime edge 
    GTTTGAAGGT AAATATTATT TCCCTCTTCC CTTTCCCTCA AGTCTCAAAC 
    ATCANTATGG GTCAAACCTA ACCTGAAACT ATCTTTTATA AACTTGGGTC 
    TCAGGAGATA AGCGAAAATG GAACACATTC TGGAGAAACT ACAGGGAAAC 
    ACNGAGTTCT GGCCTGTTTA GTATGTTCTC AATACCAAGA ATAGGGAGGA 
    CTCGAAGTGT GGTCAACACA GGGCCTACTA ACATCCATTG GNCCCCAGTA 
    TGNCGNNNGN CCCTNNTGAA NAGAGAGNGT GATNNTTCAA NTGATCAGCN 
    ANCCANAGAT GGTTTANTNC TACTANAGGA NCTGATTCNA TCATGCTNGC 
    GNATTNTGCT AGAACCCTTG NTTAGNGTNC CNCTCCTGTN NTNNATGNTG 
    CATAATNTTT NGTANGGNCT GCCNCTTTAT NTTCAANNGG GANTNANTNT 
    NNNNNTAGAN NCANNGNGNG NNGNCTGCCA NNCNCNAGAN NTTGANTTTT 
    NACNGNNAGA GNNNTCGAAT GNTTTTNNTA TTGTGGGGNN TCTNTNTNNC 
    CNTNNNTACN TTCNNNCCNA NTANATGAGG TTNCNCTNNN TNCNNCCNCC 
    CGATNTCACA TGNAANNTTT NTTGTGNNNN ATNTCNCNGA NNGAGNNCAG 
    ACANNNCNCT NNNTNCNANG NGANNGGCGN NNGNTATTAN TGANTANTAT 
    TTTATNNTCA TTGATAATNN NAANNNNANA NATNAACNAN NNNNCNTNNC 
    CNTGNNNTAT NCTATCTANN TAATCNNNNA CNACATCTN

AT1G24267.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 154 Blast hits to 152 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24267.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR