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16-0330-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8410368 [Map]; Strand: w
      • AT1G23790.1 - [+] show detail - Plant protein of unknown function (DUF936)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0330-1 - 5-prime edge 
    CTTCCTTCAG ATCAAGACGA CGACGTTTTA AGCAACAAGA TGCAGTTAGG 
    TCAGTTTATC TACGTTGATC GGCTTGATCC AGGGACACCT GTTCCGATCA 
    TCAAAGGTGC TAGACCGATT CCCGGACGAC ATCCTTTGCT TGGAACTCCT 
    GAGCCATTGA TGAGTACAAG AGGAAAGATT GAGAGTTCGA GACCTAGAAG 
    AGGTTCTTGG GGTCAAAACG GTGACGTTTC GTCTCCGTTT GTGTTAAAGC 
    CTGCGCCTTT GGATTTTGAT CAGTGTACTC CGGCGAAACA TAAGATTGGT 
    AATGGGAGAT TTATGGCGGC GTCTCCGGTT GTTATGACTA GAGGGAGGTC 
    ACCAGGTGGT GTTAGGTGTT CTTATGGTGG AGGGCTTTTG TCGAAAATGG 
    CGGAGAGTCC TGCTGCAATG ATGAGGAAGA GCTGTGTTGT TCCGCCGAGT 
    TCTAAGTTTC CGAGAAGTAN AAGTGTCTGC NATNGAGAGA CAATGGCGAA 
    NAACTCTGNT CTTTTTANTC CTTTTAAATN CTNTGAGGTA CTNNNNCCTC 
    TCTGNTNTTN TATATTNGCT NANGCNTNNN GGTTTNTGAN TTAACAANGG 
    NNNNGNNGGC NAANAAAAAN NATTNNNCGN CTNNNNNNGN NCNNNCTNNA 
    NAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8410252 [Map]; Strand: w
      • AT1G23790.1 - [+] show detail - Plant protein of unknown function (DUF936)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0330-1 - 3-prime edge 
    GAAGGAAGGC TAACGTAGAT TGAATGAGAA GAATCAGAGA CTTTTATGAA 
    GAAGCCTTGT TTCGGTAAAA GATTCTTCTC GTCAAGATCA ATAGGGACGA 
    TATCTGTGAC TTGTAATAAC GAGCTTCTGT GTTCTCCGGT CGGTTTAACT 
    CCGGTTTTCA TACCGTCGAT TAGCTTTTGA AGGATTCCGG GGGCTAAAGC 
    CGCCATTGTT GTTGAGTTTC AAGATCGAGA CTTTGTGATT CAGATGAGAA 
    ATTCAAGAAA TGGGTATGGA TCGGGAAGAA GAATTTAGGG TTTTATTTGT 
    TACGGAGAGA TCCAACGGTA AGTAAGTTTG GTTGAAGAAG AAAGAGGATT 
    GGGATAATTG AAAATAAAAA TCGAAACTTT TTTGAATAAA GAAGAAAATA 
    ATTGGGGATT TTTTTTTGTT TTGGAACGTT GTGAGCAACG GTCGAATTTG 
    GTGGNGGGTC TTTGTATTGT ATTCGTATGC GTAATTTATT TTTATTGATT 
    TGTATAATTA CATCTAATCT GGATGGATCT TCTTGTTTTT ATTGTACGCA 
    TCCCACGCTA ATCCCATATG TTTTCTAGTC TATTANNCAA CTATATTTAT 
    AACATTTAAT TTGGTTATTA GTAATCAGNC AAAATCTGCA AAAATAAGTT 
    NGATGCNAAA TTGNGTATTT GCTCAAAAAA AAAAAAAAAN AANGGGAAAN 
    GGGNNNGNNT NANGNNTTNN AANCCNANGG GGNTNNNCCC CNNTTTTNAA 
    ANGGNNGGNN NNAN

AT1G23790.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF936)
Computational Description
Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR