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Mutant Lines
16-0353-1

16-0353-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30140415 [Map]; Strand: c
- AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
  Distance: 211; Region: intergenic
- AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 546; Region: intergenic

GTAGTTTGTA CCCATAACAT ATACTCTTAT TTGACACAAT TTTTCTAAGC 
TATCACTATC TCCCATAGAT TTGGAGTATT ATAGTTGAAC CGTCCTATAA 
AGGCTATGTC AATGGAGAGA GAAAAATAGA TGGAACACNT TTTAAGGGTT 
TGGTCGCTTT GATATTTAAA TTTGCAACTC GTTCAAGCTA ATATACAAGT 
TGTAACTTTT CGCCTAACTC ACCAACAAAA GCAAAATGAA TTAGACACAA 
AAGTAATGTT TATCTACAAC TAAACTCCTT TCGTAAACCC TTTTTTTCTT 
TCAAATCAAA CAGCTGTAAC TGAGTAAGAA ATTCAAACCA GATTACAACA 
GCCCATGGGA ATGACGAGAA ATAATTTGTC CAAATCGTTT CCTTTCAAAC 
CGACACAAAC TCACAATAAT TATTATTTTT CCACTCGGTT TTGTTTGCGT 
CCCACCAAAA AAGAAGAAAA CAAAAACAAA AAAAGGGTGA AAAATCAAAT 
CAGAGATCTT CTGCGGAAGG GTGCACCTGT TCCTCACCAA CCTCAAGGAG 
ATCGTCGCCG TAGATTTGAT CAAGCACAAG AACCAATCCC ATTGCAAAGG 
CTCCATCAAA ACCGGGCTTC ACGTTCAACG AGAAAACGTC TTTCCCAAGC 
ATCACGTTCG TTGACGCATC CACTTTGCGC CTTATCTCCG NCACCTTCCG 
CCTTGTNTNC GCCTNCACCA CCGTGCAGTT CCTTGCCCCG AACT

3 prime edge [+] show sequence

Chromosome: 1; Position: 30140498 [Map]; Strand: c
- AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
  Distance: 294; Region: intergenic
- AT1G80130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 463; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATTAATAAAT ATACATAGTT ACAATGGAAA TTGTCGAAAG AAAAAGAAGG 
AAAAGTTTCA TCTTCTTAAA AAGAAATATT GGACGGAAAG CATGTCGGTG 
TATGACCAAA CAGTAGTAAA TAGTTAAGCA GACAGGAAGC CTTGATTATA 
CGAATAACAA GTTTTTTTGG TTCATACGGT GATCGTCTTT TGTTCACAAA 
AAGAAAAAAC TTCTTCGTCT CTTATCTTAG CTGGATCATA ACTAACTATT 
TAGATAGACA AAGTTAAAGA TCAAATTCTC CTTGCATTTA AGTTGTCCAC 
ACCTCTTTTC TAGTATAATC ATTTTCTTGT TTCGTGGAAT GGTCACATTG 
AATTTTAATT TTGGCCCATT AGCCCACTAA CATGTGGAGG TTACCAACGA 
GAAATCAGAT GTTTAGGCCC AAGTATATAA GAACAAGATA TCTTTGACTT 
TAACTCCAAA CAAAATCGAT CGATCTGTAT CATCAATTTC ATCATACTTT 
TTTTTAACAA ACAAATGCCT AATATTTTGT CTATCTCGAT AGGACATGGG 
TAAGTTTCAT ACTTTATAAT ACAAAAAGAC ACATAAATAC TGCAAATATA 
AGTACATACC CTTATTATGA AGACTACAGA ACATATACAA AGATTCTGAA 
CATATATTAT ACACGCATAT TGCATTTGAG TATGNGTATT AAATATGCTT 
CTATATATGT TATTTACCTA AATACNAACA TTCACNAAGG TGTTCATATG 
TGTCTTANGA TGATGCG

AT1G80120.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF567)
Computational Description: Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80130.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: response to oxidative stress; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR