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16-0360-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 89611 [Map]; Strand: c
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -425; Region: promoter
    Flanking Genome Sequence: 16-0360-1 - 5-prime edge 
    CACACAACTA TCTTATGGTA TATACCAATT GTAATATATG AACATTCAAT 
    CTAATACTAT GAGAAATTAA TTTTACAAAC AAATAAATGT ATAAAATAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 89727 [Map]; Strand: c
      • AT4G00220.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
        Distance: -309; Region: promoter
    Flanking Genome Sequence: 16-0360-1 - 3-prime edge 
    GTTGTGTGGT TCGATGTAAC AAAAATAAAA TTAAACCAGA AGTAGAAAAA 
    GTGAAGGAAA GGGAATAACA ATGAAGAAGT TGAAAGATAT GGAATGTTTT 
    GCTTCACGCA AAGAGCTTAA CACGAGACAA GTACGCTCCA TCGCGTTGCT 
    TTGAAGTCTT TTTTTTCTTC TTCTTCTTCT TGTCTTAACC TCTTTTTTAT 
    TTTTTAGTCT TGGTAATAAC AAGACTAATT AAATTATTAT TTTACTTTTT 
    TTATTATCTA CCAACAACCA AACCCTAGTT TTGCTTACGT CCGATCTCCT 
    CCTTCTCTCT TTTCTTCTCT CCCAAACGTT CCCTTTCTTT TTTTTCTCTA 
    ATCACGAACC AAAAAGCATC ATAATCTCGA TGAGTTAAAT CCATGTATCT 
    CAAAACCCTA ATCACCACTT AGCTAGTAAA AGGAAAGGAA AATAAAAAGG 
    ACTTGTGTGG TANAAAAGGA ANATGAGCAG TAGCGGAAAC CCTACCAGCA 
    GCAGCGGTGG AGGAGGAGGA CCGTGCGGCG CGTGCAAGTT CTTGAGAAGG 
    AAGTGTGTCG CTGGCTGCAT CTTCGCTCCT TACTTTGACT CCGAGCAAGG 
    AGCGGCGCAC TTTCGCGGCG GTTCACAAGG TGTTCGGAGC GAGCAACGTC 
    TCCAAACTCC TCCACCATGT TCCCGAGCAT AAACGACCAN ACGCCGNCGT 
    TTCAATCTGC TTTGAGGCTC AAGCTCNTNT CAAANACCCT TCTACGGCTG 
    CGTTCTCTCA CATG

AT4G00220.1

Model type
Protein coding
Short Description
Lateral organ boundaries (LOB) domain family protein
Curator Summary
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.
Computational Description
JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR