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16-0429-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11568056 [Map]; Strand: w
      • AT4G21780.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 357; Region: intergenic
      • AT4G21790.1 - [+] show detail - tobamovirus multiplication 1
        Distance: -1709; Region: intergenic
    Flanking Genome Sequence: 16-0429-1 - 3-prime edge 
    GCTACTACGT ACAGAGCCAA GAGCAAAATC TTAGTCACCT GTGACAAATA 
    TGATAACATC GTCTCTTTTT TGGAATT

AT4G21780.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G21790.1

Model type
Protein coding
Short Description
tobamovirus multiplication 1
Curator Summary
encodes a host factor that is required for TMV virus multiplication.
Computational Description
tobamovirus multiplication 1 (TOM1); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: vacuolar membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR